Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 AC079316.1-201ENST00000548397 411 ntBASIC17.54■□□□□ 0.4
RNF20Q5VTR2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 KRT8P4-201ENST00000509735 1454 ntBASIC17.54■□□□□ 0.4
RNF20Q5VTR2 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 PDIA3P1-201ENST00000471856 1510 ntBASIC17.53■□□□□ 0.4
RNF20Q5VTR2 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 AC027237.1-201ENST00000560942 655 ntBASIC17.53■□□□□ 0.4
RNF20Q5VTR2 C2orf69P2-201ENST00000562032 1123 ntBASIC17.53■□□□□ 0.4
RNF20Q5VTR2 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 AL358472.3-201ENST00000608147 415 ntBASIC17.53■□□□□ 0.4
RNF20Q5VTR2 AC027601.3-201ENST00000622907 509 ntBASIC17.53■□□□□ 0.4
RNF20Q5VTR2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RNF20Q5VTR2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 AC016397.2-201ENST00000624848 1985 ntBASIC17.52■□□□□ 0.4
RNF20Q5VTR2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms