Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 PCDHA5-203ENST00000614258 4248 ntBASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 BAD-202ENST00000394531 631 ntTSL 3 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 WRB-204ENST00000398753 699 ntTSL 3 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 SERF2-209ENST00000409646 559 ntTSL 4 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 CNN2P11-201ENST00000429351 262 ntBASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 AC114812.1-204ENST00000449669 728 ntBASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 KLF2P3-201ENST00000451977 1087 ntBASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 AL589987.1-201ENST00000453380 819 ntBASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 BAD-207ENST00000544785 525 ntTSL 3 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 RARRES2P5-201ENST00000564013 466 ntBASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 AC140878.1-201ENST00000565277 250 ntBASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 Z92544.3-201ENST00000624747 417 ntBASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 TUBB8P4-201ENST00000511806 1324 ntBASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 AC004241.5-201ENST00000623870 2448 ntBASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 RPSAP43-201ENST00000402237 625 ntBASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 COX10-202ENST00000429152 875 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 GIMAP3P-201ENST00000495150 836 ntBASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms