Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
CKS1BP61024 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS1BP61024 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC10.41□□□□□ -0.74
CKS1BP61024 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
CKS1BP61024 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC10.4□□□□□ -0.74
CKS1BP61024 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS1BP61024 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
CKS1BP61024 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
CKS1BP61024 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS1BP61024 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS1BP61024 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
CKS1BP61024 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
CKS1BP61024 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
CKS1BP61024 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS1BP61024 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
CKS1BP61024 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC10.4□□□□□ -0.74
CKS1BP61024 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
CKS1BP61024 UXT-AS1-201ENST00000590504 1525 ntBASIC10.4□□□□□ -0.74
CKS1BP61024 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC10.4□□□□□ -0.74
CKS1BP61024 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 MRPL3P1-201ENST00000400109 1033 ntBASIC10.4□□□□□ -0.74
CKS1BP61024 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC10.4□□□□□ -0.74
CKS1BP61024 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS1BP61024 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC10.4□□□□□ -0.74
CKS1BP61024 AL450487.1-201ENST00000426799 995 ntBASIC10.4□□□□□ -0.74
CKS1BP61024 AL353705.2-201ENST00000428243 662 ntBASIC10.4□□□□□ -0.74
CKS1BP61024 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC10.4□□□□□ -0.74
CKS1BP61024 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC10.4□□□□□ -0.74
CKS1BP61024 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.4□□□□□ -0.74
CKS1BP61024 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS1BP61024 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS1BP61024 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS1BP61024 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS1BP61024 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
CKS1BP61024 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC10.4□□□□□ -0.74
CKS1BP61024 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC10.4□□□□□ -0.74
CKS1BP61024 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC10.4□□□□□ -0.74
CKS1BP61024 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC10.4□□□□□ -0.74
CKS1BP61024 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
CKS1BP61024 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
CKS1BP61024 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS1BP61024 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CKS1BP61024 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS1BP61024 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS1BP61024 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
CKS1BP61024 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
CKS1BP61024 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.75
CKS1BP61024 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
CKS1BP61024 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CKS1BP61024 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CKS1BP61024 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
CKS1BP61024 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CKS1BP61024 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
CKS1BP61024 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC10.4□□□□□ -0.75
CKS1BP61024 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
CKS1BP61024 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CKS1BP61024 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS1BP61024 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
CKS1BP61024 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS1BP61024 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS1BP61024 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC10.39□□□□□ -0.75
CKS1BP61024 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
CKS1BP61024 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CKS1BP61024 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC10.39□□□□□ -0.75
CKS1BP61024 MAPT-IT1-201ENST00000624111 3016 ntBASIC10.39□□□□□ -0.75
CKS1BP61024 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS1BP61024 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS1BP61024 GOLGA2P5-201ENST00000266746 2395 ntBASIC10.39□□□□□ -0.75
CKS1BP61024 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
CKS1BP61024 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS1BP61024 AC022400.8-201ENST00000623453 3599 ntBASIC10.39□□□□□ -0.75
CKS1BP61024 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS1BP61024 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS1BP61024 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CKS1BP61024 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC10.39□□□□□ -0.75
CKS1BP61024 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS1BP61024 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CKS1BP61024 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC10.39□□□□□ -0.75
CKS1BP61024 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS1BP61024 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC10.39□□□□□ -0.75
CKS1BP61024 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms