Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.03□□□□□ -0.32
SLC25A1P53007 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC25A1P53007 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.03□□□□□ -0.32
SLC25A1P53007 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
SLC25A1P53007 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SLC25A1P53007 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.03□□□□□ -0.32
SLC25A1P53007 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
SLC25A1P53007 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC25A1P53007 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SLC25A1P53007 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.03□□□□□ -0.32
SLC25A1P53007 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC25A1P53007 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC25A1P53007 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
SLC25A1P53007 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC25A1P53007 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
SLC25A1P53007 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.03□□□□□ -0.32
SLC25A1P53007 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC25A1P53007 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC25A1P53007 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC25A1P53007 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.03□□□□□ -0.32
SLC25A1P53007 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SLC25A1P53007 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.03□□□□□ -0.32
SLC25A1P53007 AC004945.1-201ENST00000416738 983 ntBASIC13.03□□□□□ -0.32
SLC25A1P53007 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.03□□□□□ -0.32
SLC25A1P53007 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SLC25A1P53007 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.03□□□□□ -0.32
SLC25A1P53007 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.03□□□□□ -0.32
SLC25A1P53007 TDH-203ENST00000531764 1110 ntBASIC13.03□□□□□ -0.32
SLC25A1P53007 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.03□□□□□ -0.32
SLC25A1P53007 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
SLC25A1P53007 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.03□□□□□ -0.32
SLC25A1P53007 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.03□□□□□ -0.32
SLC25A1P53007 RPSAP52-203ENST00000622976 1023 ntBASIC13.03□□□□□ -0.32
SLC25A1P53007 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.03□□□□□ -0.32
SLC25A1P53007 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC25A1P53007 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SLC25A1P53007 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.03□□□□□ -0.32
SLC25A1P53007 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.03□□□□□ -0.32
SLC25A1P53007 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.03□□□□□ -0.32
SLC25A1P53007 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC25A1P53007 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
SLC25A1P53007 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC25A1P53007 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SLC25A1P53007 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.03□□□□□ -0.32
SLC25A1P53007 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SLC25A1P53007 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SLC25A1P53007 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.02□□□□□ -0.32
SLC25A1P53007 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SLC25A1P53007 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SLC25A1P53007 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
SLC25A1P53007 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.02□□□□□ -0.32
SLC25A1P53007 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SLC25A1P53007 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SLC25A1P53007 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SLC25A1P53007 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
SLC25A1P53007 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
SLC25A1P53007 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SLC25A1P53007 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SLC25A1P53007 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
SLC25A1P53007 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
SLC25A1P53007 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SLC25A1P53007 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.02□□□□□ -0.33
SLC25A1P53007 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 USP17L6P-201ENST00000382470 1197 ntBASIC13.02□□□□□ -0.33
SLC25A1P53007 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.02□□□□□ -0.33
SLC25A1P53007 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 AL035414.1-201ENST00000451327 857 ntBASIC13.02□□□□□ -0.33
SLC25A1P53007 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.02□□□□□ -0.33
SLC25A1P53007 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.02□□□□□ -0.33
SLC25A1P53007 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.02□□□□□ -0.33
SLC25A1P53007 AC190387.1-201ENST00000551683 408 ntBASIC13.02□□□□□ -0.33
SLC25A1P53007 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.02□□□□□ -0.33
SLC25A1P53007 AC025279.2-201ENST00000569730 653 ntBASIC13.02□□□□□ -0.33
SLC25A1P53007 AC008825.2-201ENST00000603374 718 ntBASIC13.02□□□□□ -0.33
SLC25A1P53007 AL096865.1-201ENST00000606796 927 ntBASIC13.02□□□□□ -0.33
SLC25A1P53007 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.02□□□□□ -0.33
SLC25A1P53007 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.02□□□□□ -0.33
SLC25A1P53007 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SLC25A1P53007 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.02□□□□□ -0.33
SLC25A1P53007 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.02□□□□□ -0.33
SLC25A1P53007 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.02□□□□□ -0.33
SLC25A1P53007 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.02□□□□□ -0.33
SLC25A1P53007 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SLC25A1P53007 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC25A1P53007 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms