Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 RNA5SP417-201ENST00000516459 108 ntBASIC16.07■□□□□ 0.16
CPT1AP50416 MIR2392-201ENST00000584881 84 ntBASIC16.07■□□□□ 0.16
CPT1AP50416 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CPT1AP50416 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 AC022532.1-201ENST00000624563 1728 ntBASIC16.07■□□□□ 0.16
CPT1AP50416 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.07■□□□□ 0.16
CPT1AP50416 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CPT1AP50416 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CPT1AP50416 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.07■□□□□ 0.16
CPT1AP50416 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CPT1AP50416 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.06■□□□□ 0.16
CPT1AP50416 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.06■□□□□ 0.16
CPT1AP50416 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.06■□□□□ 0.16
CPT1AP50416 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
CPT1AP50416 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.06■□□□□ 0.16
CPT1AP50416 BAK1P1-201ENST00000317045 636 ntBASIC16.06■□□□□ 0.16
CPT1AP50416 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.06■□□□□ 0.16
CPT1AP50416 AC098934.1-203ENST00000442868 1262 ntBASIC16.06■□□□□ 0.16
CPT1AP50416 AC018638.5-201ENST00000450885 754 ntBASIC16.06■□□□□ 0.16
CPT1AP50416 DPY19L2P5-201ENST00000456300 331 ntBASIC16.06■□□□□ 0.16
CPT1AP50416 AL157792.1-201ENST00000488281 530 ntBASIC16.06■□□□□ 0.16
CPT1AP50416 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CPT1AP50416 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.06■□□□□ 0.16
CPT1AP50416 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.06■□□□□ 0.16
CPT1AP50416 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.06■□□□□ 0.16
CPT1AP50416 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.06■□□□□ 0.16
CPT1AP50416 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.06■□□□□ 0.16
CPT1AP50416 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CPT1AP50416 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.06■□□□□ 0.16
CPT1AP50416 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.06■□□□□ 0.16
CPT1AP50416 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPT1AP50416 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPT1AP50416 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPT1AP50416 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.05■□□□□ 0.16
CPT1AP50416 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CPT1AP50416 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CPT1AP50416 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.05■□□□□ 0.16
CPT1AP50416 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.05■□□□□ 0.16
CPT1AP50416 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CPT1AP50416 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.05■□□□□ 0.16
CPT1AP50416 AC006372.4-201ENST00000624122 1543 ntBASIC16.05■□□□□ 0.16
CPT1AP50416 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.05■□□□□ 0.16
CPT1AP50416 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPT1AP50416 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPT1AP50416 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
CPT1AP50416 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPT1AP50416 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPT1AP50416 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CPT1AP50416 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPT1AP50416 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPT1AP50416 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.05■□□□□ 0.16
CPT1AP50416 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPT1AP50416 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CPT1AP50416 OR5BD1P-201ENST00000532527 817 ntBASIC16.05■□□□□ 0.16
CPT1AP50416 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.05■□□□□ 0.16
CPT1AP50416 SORD2P-201ENST00000558556 1069 ntBASIC16.05■□□□□ 0.16
CPT1AP50416 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.05■□□□□ 0.16
CPT1AP50416 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CPT1AP50416 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.05■□□□□ 0.16
CPT1AP50416 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPT1AP50416 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CPT1AP50416 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPT1AP50416 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CPT1AP50416 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CPT1AP50416 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CPT1AP50416 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPT1AP50416 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.05■□□□□ 0.16
CPT1AP50416 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPT1AP50416 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms