Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP11P24347 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP11P24347 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
MMP11P24347 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP11P24347 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MMP11P24347 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.95□□□□□ -0.18
MMP11P24347 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MMP11P24347 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP11P24347 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.95□□□□□ -0.18
MMP11P24347 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MMP11P24347 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.95□□□□□ -0.18
MMP11P24347 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
MMP11P24347 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.95□□□□□ -0.18
MMP11P24347 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MMP11P24347 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
MMP11P24347 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
MMP11P24347 AL928921.2-201ENST00000641325 2442 ntBASIC13.94□□□□□ -0.18
MMP11P24347 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.94□□□□□ -0.18
MMP11P24347 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.94□□□□□ -0.18
MMP11P24347 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.94□□□□□ -0.18
MMP11P24347 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.94□□□□□ -0.18
MMP11P24347 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
MMP11P24347 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
MMP11P24347 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 SLC25A24P2-201ENST00000415059 510 ntBASIC13.94□□□□□ -0.18
MMP11P24347 FAM58BP-201ENST00000439056 645 ntBASIC13.94□□□□□ -0.18
MMP11P24347 AC005077.2-201ENST00000449786 690 ntBASIC13.94□□□□□ -0.18
MMP11P24347 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.94□□□□□ -0.18
MMP11P24347 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 AC005740.2-201ENST00000511085 419 ntBASIC13.94□□□□□ -0.18
MMP11P24347 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
MMP11P24347 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 NDUFV2P1-201ENST00000596415 907 ntBASIC13.94□□□□□ -0.18
MMP11P24347 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
MMP11P24347 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
MMP11P24347 AC022748.3-201ENST00000621828 275 ntBASIC13.94□□□□□ -0.18
MMP11P24347 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.94□□□□□ -0.18
MMP11P24347 AC068587.10-201ENST00000641210 219 ntBASIC13.94□□□□□ -0.18
MMP11P24347 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.94□□□□□ -0.18
MMP11P24347 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.94□□□□□ -0.18
MMP11P24347 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
MMP11P24347 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
MMP11P24347 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
MMP11P24347 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP11P24347 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
MMP11P24347 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
MMP11P24347 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.93□□□□□ -0.18
MMP11P24347 AC003102.2-201ENST00000589195 1469 ntBASIC13.93□□□□□ -0.18
MMP11P24347 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
MMP11P24347 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
MMP11P24347 AC097376.2-205ENST00000610159 5334 ntBASIC13.93□□□□□ -0.18
MMP11P24347 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.93□□□□□ -0.18
MMP11P24347 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.93□□□□□ -0.18
MMP11P24347 AC015802.1-201ENST00000588104 1449 ntBASIC13.93□□□□□ -0.18
MMP11P24347 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.93□□□□□ -0.18
MMP11P24347 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.93□□□□□ -0.18
MMP11P24347 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.93□□□□□ -0.18
MMP11P24347 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.93□□□□□ -0.18
MMP11P24347 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
MMP11P24347 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.93□□□□□ -0.18
MMP11P24347 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 AL008707.1-201ENST00000422498 534 ntBASIC13.93□□□□□ -0.18
MMP11P24347 AC016700.1-201ENST00000429424 312 ntBASIC13.93□□□□□ -0.18
MMP11P24347 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.93□□□□□ -0.18
MMP11P24347 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms