Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.33□□□□□ -0.6
RAB4AP20338 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.33□□□□□ -0.6
RAB4AP20338 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.33□□□□□ -0.6
RAB4AP20338 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.33□□□□□ -0.6
RAB4AP20338 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.33□□□□□ -0.6
RAB4AP20338 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.33□□□□□ -0.6
RAB4AP20338 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.33□□□□□ -0.6
RAB4AP20338 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
RAB4AP20338 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC11.33□□□□□ -0.6
RAB4AP20338 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 CSPG4P13-202ENST00000567704 4801 ntBASIC11.33□□□□□ -0.6
RAB4AP20338 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
RAB4AP20338 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 KRT8P37-201ENST00000451609 1420 ntBASIC11.33□□□□□ -0.6
RAB4AP20338 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC11.33□□□□□ -0.6
RAB4AP20338 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.33□□□□□ -0.6
RAB4AP20338 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
RAB4AP20338 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 SHROOM2P1-201ENST00000434773 2384 ntBASIC11.32□□□□□ -0.6
RAB4AP20338 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
RAB4AP20338 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.32□□□□□ -0.6
RAB4AP20338 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC11.32□□□□□ -0.6
RAB4AP20338 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.32□□□□□ -0.6
RAB4AP20338 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.32□□□□□ -0.6
RAB4AP20338 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.32□□□□□ -0.6
RAB4AP20338 RPS8P6-201ENST00000426177 609 ntBASIC11.32□□□□□ -0.6
RAB4AP20338 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
RAB4AP20338 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.32□□□□□ -0.6
RAB4AP20338 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.32□□□□□ -0.6
RAB4AP20338 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.32□□□□□ -0.6
RAB4AP20338 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
RAB4AP20338 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RAB4AP20338 POU2F2-201ENST00000342301 3730 ntTSL 5 BASIC11.32□□□□□ -0.6
RAB4AP20338 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RAB4AP20338 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.32□□□□□ -0.6
RAB4AP20338 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RAB4AP20338 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.32□□□□□ -0.6
RAB4AP20338 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.32□□□□□ -0.6
RAB4AP20338 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
RAB4AP20338 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.32□□□□□ -0.6
RAB4AP20338 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RAB4AP20338 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RAB4AP20338 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB4AP20338 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.32□□□□□ -0.6
RAB4AP20338 AP002414.3-201ENST00000589352 1468 ntBASIC11.32□□□□□ -0.6
RAB4AP20338 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB4AP20338 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB4AP20338 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 AL512791.2-201ENST00000615251 4609 ntBASIC11.31□□□□□ -0.6
RAB4AP20338 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
RAB4AP20338 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB4AP20338 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB4AP20338 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB4AP20338 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 PLSCR1-201ENST00000342435 2233 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB4AP20338 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms