Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
PCNAP12004 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.39□□□□□ -0.11
PCNAP12004 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.39□□□□□ -0.11
PCNAP12004 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.38□□□□□ -0.11
PCNAP12004 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.38□□□□□ -0.11
PCNAP12004 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.38□□□□□ -0.11
PCNAP12004 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 AL136172.1-201ENST00000598590 1394 ntBASIC14.38□□□□□ -0.11
PCNAP12004 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCNAP12004 AC005252.3-201ENST00000623855 2258 ntBASIC14.38□□□□□ -0.11
PCNAP12004 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.38□□□□□ -0.11
PCNAP12004 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.38□□□□□ -0.11
PCNAP12004 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
PCNAP12004 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.38□□□□□ -0.11
PCNAP12004 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.38□□□□□ -0.11
PCNAP12004 AC245100.3-201ENST00000441281 285 ntBASIC14.38□□□□□ -0.11
PCNAP12004 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
PCNAP12004 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.38□□□□□ -0.11
PCNAP12004 AC007389.4-201ENST00000454674 793 ntBASIC14.38□□□□□ -0.11
PCNAP12004 INE1-201ENST00000456273 945 ntBASIC14.38□□□□□ -0.11
PCNAP12004 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.38□□□□□ -0.11
PCNAP12004 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.38□□□□□ -0.11
PCNAP12004 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.38□□□□□ -0.11
PCNAP12004 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PCNAP12004 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.38□□□□□ -0.11
PCNAP12004 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCNAP12004 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCNAP12004 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PCNAP12004 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.38□□□□□ -0.11
PCNAP12004 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 AC092135.3-201ENST00000624151 1846 ntBASIC14.38□□□□□ -0.11
PCNAP12004 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.38□□□□□ -0.11
PCNAP12004 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.38□□□□□ -0.11
PCNAP12004 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.38□□□□□ -0.11
PCNAP12004 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.38□□□□□ -0.11
PCNAP12004 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCNAP12004 AC003102.2-201ENST00000589195 1469 ntBASIC14.38□□□□□ -0.11
PCNAP12004 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PCNAP12004 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCNAP12004 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCNAP12004 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCNAP12004 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCNAP12004 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCNAP12004 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.37□□□□□ -0.11
PCNAP12004 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCNAP12004 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.37□□□□□ -0.11
PCNAP12004 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
PCNAP12004 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PCNAP12004 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.37□□□□□ -0.11
PCNAP12004 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.37□□□□□ -0.11
PCNAP12004 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCNAP12004 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PCNAP12004 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCNAP12004 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PCNAP12004 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PCNAP12004 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCNAP12004 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCNAP12004 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCNAP12004 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.37□□□□□ -0.11
PCNAP12004 TLE1P1-201ENST00000422965 589 ntBASIC14.37□□□□□ -0.11
PCNAP12004 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.37□□□□□ -0.11
PCNAP12004 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCNAP12004 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.37□□□□□ -0.11
PCNAP12004 AP005018.1-201ENST00000525475 301 ntBASIC14.37□□□□□ -0.11
PCNAP12004 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.37□□□□□ -0.11
PCNAP12004 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PCNAP12004 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.37□□□□□ -0.11
PCNAP12004 ENPP7P14-201ENST00000621765 1040 ntBASIC14.37□□□□□ -0.11
PCNAP12004 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.37□□□□□ -0.11
PCNAP12004 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms