Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.19■□□□□ 0.02
CD48P09326 CTBP2P5-201ENST00000454986 1264 ntBASIC15.19■□□□□ 0.02
CD48P09326 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.19■□□□□ 0.02
CD48P09326 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CD48P09326 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.19■□□□□ 0.02
CD48P09326 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.19■□□□□ 0.02
CD48P09326 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.19■□□□□ 0.02
CD48P09326 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.19■□□□□ 0.02
CD48P09326 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.19■□□□□ 0.02
CD48P09326 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.19■□□□□ 0.02
CD48P09326 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.19■□□□□ 0.02
CD48P09326 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.19■□□□□ 0.02
CD48P09326 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 ZACNP1-201ENST00000612259 710 ntBASIC15.19■□□□□ 0.02
CD48P09326 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.19■□□□□ 0.02
CD48P09326 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.19■□□□□ 0.02
CD48P09326 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CD48P09326 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.19■□□□□ 0.02
CD48P09326 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.19■□□□□ 0.02
CD48P09326 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CD48P09326 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.19■□□□□ 0.02
CD48P09326 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.19■□□□□ 0.02
CD48P09326 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.19■□□□□ 0.02
CD48P09326 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CD48P09326 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD48P09326 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CD48P09326 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CD48P09326 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.18■□□□□ 0.02
CD48P09326 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.18■□□□□ 0.02
CD48P09326 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CD48P09326 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.18■□□□□ 0.02
CD48P09326 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CD48P09326 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.18■□□□□ 0.02
CD48P09326 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 AC010141.1-201ENST00000411585 623 ntBASIC15.18■□□□□ 0.02
CD48P09326 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.18■□□□□ 0.02
CD48P09326 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.18■□□□□ 0.02
CD48P09326 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
CD48P09326 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.18■□□□□ 0.02
CD48P09326 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.18■□□□□ 0.02
CD48P09326 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.18■□□□□ 0.02
CD48P09326 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.18■□□□□ 0.02
CD48P09326 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.18■□□□□ 0.02
CD48P09326 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.18■□□□□ 0.02
CD48P09326 AL136301.1-201ENST00000615830 422 ntBASIC15.18■□□□□ 0.02
CD48P09326 AC027601.3-201ENST00000622907 509 ntBASIC15.18■□□□□ 0.02
CD48P09326 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CD48P09326 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CD48P09326 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.18■□□□□ 0.02
CD48P09326 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.18■□□□□ 0.02
CD48P09326 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD48P09326 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CD48P09326 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.18■□□□□ 0.02
CD48P09326 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CD48P09326 E2F3P2-201ENST00000447755 1422 ntBASIC15.17■□□□□ 0.02
CD48P09326 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD48P09326 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD48P09326 SHC1P1-201ENST00000425230 1745 ntBASIC15.17■□□□□ 0.02
CD48P09326 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CD48P09326 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD48P09326 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD48P09326 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CD48P09326 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD48P09326 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD48P09326 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.17■□□□□ 0.02
CD48P09326 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD48P09326 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CD48P09326 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD48P09326 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD48P09326 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD48P09326 MIR326-201ENST00000362220 95 ntBASIC15.17■□□□□ 0.02
CD48P09326 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD48P09326 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CD48P09326 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.17■□□□□ 0.02
CD48P09326 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD48P09326 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.17■□□□□ 0.02
CD48P09326 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms