Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
APOA1P02647 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.15□□□□□ -0.3
APOA1P02647 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
APOA1P02647 AL133267.1-201ENST00000398220 340 ntBASIC13.15□□□□□ -0.3
APOA1P02647 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.15□□□□□ -0.3
APOA1P02647 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.15□□□□□ -0.3
APOA1P02647 AC098831.1-202ENST00000438821 336 ntBASIC13.15□□□□□ -0.3
APOA1P02647 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
APOA1P02647 AP002472.1-201ENST00000577490 586 ntBASIC13.15□□□□□ -0.3
APOA1P02647 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.15□□□□□ -0.3
APOA1P02647 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.15□□□□□ -0.3
APOA1P02647 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.15□□□□□ -0.3
APOA1P02647 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.15□□□□□ -0.3
APOA1P02647 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
APOA1P02647 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
APOA1P02647 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
APOA1P02647 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOA1P02647 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.15□□□□□ -0.31
APOA1P02647 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
APOA1P02647 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
APOA1P02647 KHSRPP1-201ENST00000427983 1768 ntBASIC13.15□□□□□ -0.31
APOA1P02647 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
APOA1P02647 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.14□□□□□ -0.31
APOA1P02647 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.14□□□□□ -0.31
APOA1P02647 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.14□□□□□ -0.31
APOA1P02647 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
APOA1P02647 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.14□□□□□ -0.31
APOA1P02647 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.14□□□□□ -0.31
APOA1P02647 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
APOA1P02647 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
APOA1P02647 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.14□□□□□ -0.31
APOA1P02647 KRT18P21-201ENST00000515767 1272 ntBASIC13.14□□□□□ -0.31
APOA1P02647 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.14□□□□□ -0.31
APOA1P02647 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.14□□□□□ -0.31
APOA1P02647 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
APOA1P02647 AC025181.2-201ENST00000606994 802 ntBASIC13.14□□□□□ -0.31
APOA1P02647 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
APOA1P02647 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.14□□□□□ -0.31
APOA1P02647 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
APOA1P02647 AC012617.1-204ENST00000586340 2305 ntBASIC13.14□□□□□ -0.31
APOA1P02647 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.14□□□□□ -0.31
APOA1P02647 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
APOA1P02647 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC13.14□□□□□ -0.31
APOA1P02647 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.14□□□□□ -0.31
APOA1P02647 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.14□□□□□ -0.31
APOA1P02647 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
APOA1P02647 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.14□□□□□ -0.31
APOA1P02647 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOA1P02647 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOA1P02647 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.13□□□□□ -0.31
APOA1P02647 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOA1P02647 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOA1P02647 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOA1P02647 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOA1P02647 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOA1P02647 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOA1P02647 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms