Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM38O00635 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM38O00635 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
TRIM38O00635 POM121L8P-201ENST00000417732 1281 ntBASIC14.84□□□□□ -0.03
TRIM38O00635 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.84□□□□□ -0.03
TRIM38O00635 POM121L9P-203ENST00000441984 1285 ntBASIC14.84□□□□□ -0.03
TRIM38O00635 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.84□□□□□ -0.03
TRIM38O00635 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.84□□□□□ -0.03
TRIM38O00635 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.84□□□□□ -0.03
TRIM38O00635 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM38O00635 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.84□□□□□ -0.03
TRIM38O00635 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM38O00635 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM38O00635 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM38O00635 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM38O00635 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM38O00635 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.84□□□□□ -0.03
TRIM38O00635 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRIM38O00635 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM38O00635 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM38O00635 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM38O00635 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
TRIM38O00635 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM38O00635 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM38O00635 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM38O00635 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM38O00635 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM38O00635 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRIM38O00635 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM38O00635 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
TRIM38O00635 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM38O00635 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM38O00635 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
TRIM38O00635 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM38O00635 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
TRIM38O00635 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM38O00635 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM38O00635 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRIM38O00635 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM38O00635 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM38O00635 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM38O00635 ELK2AP-201ENST00000392510 1007 ntBASIC14.83□□□□□ -0.04
TRIM38O00635 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM38O00635 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM38O00635 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM38O00635 AP003171.2-201ENST00000528208 925 ntBASIC14.83□□□□□ -0.04
TRIM38O00635 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM38O00635 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.83□□□□□ -0.04
TRIM38O00635 RN7SL713P-201ENST00000582127 302 ntBASIC14.83□□□□□ -0.04
TRIM38O00635 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
TRIM38O00635 AC073413.1-201ENST00000603927 732 ntBASIC14.83□□□□□ -0.04
TRIM38O00635 AC007663.3-201ENST00000609632 465 ntBASIC14.83□□□□□ -0.04
TRIM38O00635 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.83□□□□□ -0.04
TRIM38O00635 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRIM38O00635 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM38O00635 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRIM38O00635 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRIM38O00635 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRIM38O00635 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM38O00635 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM38O00635 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM38O00635 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRIM38O00635 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM38O00635 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM38O00635 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM38O00635 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRIM38O00635 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM38O00635 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM38O00635 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRIM38O00635 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRIM38O00635 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM38O00635 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 KRT8P4-201ENST00000509735 1454 ntBASIC14.82□□□□□ -0.04
TRIM38O00635 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM38O00635 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM38O00635 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRIM38O00635 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM38O00635 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM38O00635 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
TRIM38O00635 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM38O00635 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRIM38O00635 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRIM38O00635 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM38O00635 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM38O00635 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM38O00635 AL662890.1-201ENST00000396818 632 ntBASIC14.82□□□□□ -0.04
TRIM38O00635 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms