Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM4A7MD48 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM4A7MD48 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM4A7MD48 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM4A7MD48 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM4A7MD48 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM4A7MD48 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.84□□□□□ -0.51
SRRM4A7MD48 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM4A7MD48 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM4A7MD48 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.84□□□□□ -0.51
SRRM4A7MD48 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
SRRM4A7MD48 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.83□□□□□ -0.51
SRRM4A7MD48 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
SRRM4A7MD48 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
SRRM4A7MD48 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.83□□□□□ -0.51
SRRM4A7MD48 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.83□□□□□ -0.52
SRRM4A7MD48 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 AC004945.1-201ENST00000416738 983 ntBASIC11.83□□□□□ -0.52
SRRM4A7MD48 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 C2orf27AP3-201ENST00000434123 579 ntBASIC11.83□□□□□ -0.52
SRRM4A7MD48 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 SORD2P-201ENST00000558556 1069 ntBASIC11.83□□□□□ -0.52
SRRM4A7MD48 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 BTNL10-201ENST00000595971 695 ntBASIC11.83□□□□□ -0.52
SRRM4A7MD48 OR10B1P-201ENST00000601666 907 ntBASIC11.83□□□□□ -0.52
SRRM4A7MD48 AC244669.2-201ENST00000612320 853 ntBASIC11.83□□□□□ -0.52
SRRM4A7MD48 AL354718.3-201ENST00000616414 581 ntBASIC11.83□□□□□ -0.52
SRRM4A7MD48 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 SRP9-204ENST00000619790 377 ntTSL 2 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 CR382287.1-201ENST00000623954 586 ntBASIC11.83□□□□□ -0.52
SRRM4A7MD48 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM4A7MD48 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SRRM4A7MD48 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms