Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
C4orf47A7E2U8 AQP7P3-201ENST00000624547 1041 ntBASIC14.28□□□□□ -0.12
C4orf47A7E2U8 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
C4orf47A7E2U8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
C4orf47A7E2U8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
C4orf47A7E2U8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C4orf47A7E2U8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
C4orf47A7E2U8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.28□□□□□ -0.12
C4orf47A7E2U8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 SALL4P5-201ENST00000419001 1760 ntBASIC14.27□□□□□ -0.12
C4orf47A7E2U8 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.27□□□□□ -0.12
C4orf47A7E2U8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 KRT18P36-201ENST00000411618 1276 ntBASIC14.27□□□□□ -0.13
C4orf47A7E2U8 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 ZBED1P1-201ENST00000502364 1930 ntBASIC14.27□□□□□ -0.13
C4orf47A7E2U8 AC087481.3-201ENST00000602886 1894 ntBASIC14.27□□□□□ -0.13
C4orf47A7E2U8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C4orf47A7E2U8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 AL109954.1-202ENST00000564051 2148 ntBASIC14.26□□□□□ -0.13
C4orf47A7E2U8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 AHCYP4-201ENST00000419201 1315 ntBASIC14.26□□□□□ -0.13
C4orf47A7E2U8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 RN7SL530P-201ENST00000485097 298 ntBASIC14.26□□□□□ -0.13
C4orf47A7E2U8 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
C4orf47A7E2U8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms