Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
TRBV5-4A0A0C4DH59 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV5-4A0A0C4DH59 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 LINC01230-201ENST00000625222 3017 ntBASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 AC090643.2-201ENST00000623442 2029 ntBASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 AC078875.1-201ENST00000431907 724 ntBASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 AC004898.1-201ENST00000451057 766 ntBASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 AC104073.2-201ENST00000453737 312 ntBASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV5-4A0A0C4DH59 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 USP17L6P-201ENST00000382470 1197 ntBASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 AC009779.1-201ENST00000551138 283 ntBASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 AL132994.2-201ENST00000603120 687 ntBASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 AL591471.1-201ENST00000621855 229 ntBASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV5-4A0A0C4DH59 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 KRT8P24-201ENST00000560290 1559 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms