Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 LINC01561-201ENST00000369071 2176 ntBASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 DBH-202ENST00000393056 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 TRMT112-205ENST00000539854 659 ntTSL 2 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 HSD17B1P1-201ENST00000590052 955 ntBASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 ITIH5-209ENST00000613909 2916 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 AL662799.1-202ENST00000614205 422 ntBASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 AGAP6-203ENST00000618025 2690 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 SEC14L2-214ENST00000615189 4382 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 XPC-201ENST00000285021 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 IKZF4-202ENST00000431367 5021 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 TIAM2-201ENST00000275246 2491 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 RHBDD1-201ENST00000341329 4883 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 VDR-208ENST00000550325 3925 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 AL162727.1-201ENST00000437712 3043 ntTSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 PCBP1-AS1-227ENST00000435880 2386 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 AVIL-201ENST00000257861 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 CTAGE10P-201ENST00000318353 2408 ntBASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 TUBB8-204ENST00000564130 2438 ntTSL 5 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 PJA1-204ENST00000374584 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 AL353807.1-201ENST00000427475 662 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms