Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 BRI3P1-201ENST00000440440 378 ntBASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SHANK2Q9UPX8 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 AP001267.2-201ENST00000532619 2086 ntBASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 FOXN3-AS2-201ENST00000554071 1262 ntBASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 RN7SL556P-201ENST00000582856 298 ntBASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 AL359091.4-201ENST00000610052 409 ntBASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 CICP24-201ENST00000605464 2705 ntBASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHANK2Q9UPX8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 AL135901.1-201ENST00000451812 333 ntBASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 USB1-205ENST00000561743 1135 ntTSL 3 BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 FUCA1P1-201ENST00000374476 1351 ntBASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 TBC1D27-202ENST00000424239 1573 ntBASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 FES-203ENST00000394302 2133 ntTSL 5 BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SHANK2Q9UPX8 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 AC004554.1-201ENST00000422830 1468 ntBASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 RPS23-207ENST00000511844 530 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms