Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 ST13P19-201ENST00000442505 1124 ntBASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 RN7SL530P-201ENST00000485097 298 ntBASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 AC114947.1-202ENST00000514136 344 ntBASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 AP001065.2-201ENST00000617205 644 ntBASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.21■□□□□ 0.03
DNMT3BQ9UBC3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.21■□□□□ 0.02
DNMT3BQ9UBC3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
DNMT3BQ9UBC3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
DNMT3BQ9UBC3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
DNMT3BQ9UBC3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
DNMT3BQ9UBC3 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
DNMT3BQ9UBC3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.21■□□□□ 0.02
DNMT3BQ9UBC3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
DNMT3BQ9UBC3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
DNMT3BQ9UBC3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 AC079112.1-201ENST00000454972 939 ntBASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 FTH1P22-201ENST00000456305 520 ntBASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 CHCHD2P9-201ENST00000461726 456 ntBASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 AC124068.2-201ENST00000569473 1109 ntBASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 MIR4649-201ENST00000582839 64 ntBASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNMT3BQ9UBC3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms