Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNTN3Q9P232 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTN3Q9P232 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTN3Q9P232 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 AL133466.1-201ENST00000447582 150 ntBASIC15.7■□□□□ 0.1
CNTN3Q9P232 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTN3Q9P232 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 MIR3188-201ENST00000583494 85 ntBASIC15.7■□□□□ 0.1
CNTN3Q9P232 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 AC106872.11-201ENST00000605838 421 ntBASIC15.7■□□□□ 0.1
CNTN3Q9P232 AF254983.2-201ENST00000612331 135 ntBASIC15.7■□□□□ 0.1
CNTN3Q9P232 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNTN3Q9P232 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNTN3Q9P232 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTN3Q9P232 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTN3Q9P232 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTN3Q9P232 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTN3Q9P232 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNTN3Q9P232 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTN3Q9P232 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNTN3Q9P232 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTN3Q9P232 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTN3Q9P232 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.7■□□□□ 0.1
CNTN3Q9P232 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 PDIA3P2-201ENST00000428073 158 ntBASIC15.69■□□□□ 0.1
CNTN3Q9P232 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 AC105129.2-201ENST00000559536 390 ntBASIC15.69■□□□□ 0.1
CNTN3Q9P232 AC005586.2-201ENST00000563946 837 ntBASIC15.69■□□□□ 0.1
CNTN3Q9P232 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.69■□□□□ 0.1
CNTN3Q9P232 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTN3Q9P232 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNTN3Q9P232 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTN3Q9P232 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms