Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 MRPL3P1-201ENST00000400109 1033 ntBASIC13.88□□□□□ -0.19
NR1H4Q96RI1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 AC009947.1-201ENST00000444350 727 ntBASIC13.88□□□□□ -0.19
NR1H4Q96RI1 AL139010.1-201ENST00000454878 894 ntBASIC13.88□□□□□ -0.19
NR1H4Q96RI1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 RNA5SP415-201ENST00000517246 115 ntBASIC13.88□□□□□ -0.19
NR1H4Q96RI1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 AP001005.1-201ENST00000571755 1248 ntBASIC13.88□□□□□ -0.19
NR1H4Q96RI1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NR1H4Q96RI1 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 AC104692.2-201ENST00000603054 253 ntBASIC13.87□□□□□ -0.19
NR1H4Q96RI1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR1H4Q96RI1 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 MEX3B-202ENST00000558133 4333 ntBASIC13.86□□□□□ -0.19
NR1H4Q96RI1 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 PCDHB19P-202ENST00000625133 2914 ntBASIC13.86□□□□□ -0.19
NR1H4Q96RI1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms