Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 RNASEH2CP1-201ENST00000454281 502 ntBASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 TREX1-203ENST00000456089 629 ntTSL 3 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 KRT8P2-201ENST00000556193 944 ntBASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 AC023024.2-201ENST00000623561 1993 ntBASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 AL157823.1-201ENST00000403727 628 ntBASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 AL080243.1-201ENST00000423293 1060 ntBASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 HMGA1P2-201ENST00000430198 324 ntBASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 AL773545.2-201ENST00000442149 472 ntBASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 POLR2LP1-206ENST00000444785 187 ntBASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 AC022447.5-201ENST00000504817 392 ntBASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 AC131206.1-201ENST00000538078 1211 ntBASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 AL591424.3-201ENST00000614278 872 ntBASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 AC010531.8-201ENST00000623341 685 ntBASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 AL365181.3-201ENST00000605886 3222 ntBASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 SPTLC1P3-201ENST00000403408 259 ntBASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 AP000920.1-201ENST00000531824 344 ntBASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 AP001462.1-201ENST00000594089 452 ntBASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.16□□□□□ -0.46
CSMD1Q96PZ7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 AC022121.1-201ENST00000484584 579 ntBASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 RPS23-207ENST00000511844 530 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 AC005274.1-201ENST00000623460 802 ntBASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 KRT18P4-201ENST00000422599 1288 ntBASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 CICP12-201ENST00000455801 843 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms