Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 PCDHA5-203ENST00000614258 4248 ntBASIC12.87□□□□□ -0.35
CPNE2Q96FN4 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 C1QBPP1-201ENST00000400117 770 ntBASIC12.87□□□□□ -0.35
CPNE2Q96FN4 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.87□□□□□ -0.35
CPNE2Q96FN4 SOCS2P1-201ENST00000417727 557 ntBASIC12.87□□□□□ -0.35
CPNE2Q96FN4 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 AL442647.2-201ENST00000429864 857 ntBASIC12.87□□□□□ -0.35
CPNE2Q96FN4 AC055876.3-201ENST00000431496 288 ntBASIC12.87□□□□□ -0.35
CPNE2Q96FN4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 GIMAP3P-201ENST00000495150 836 ntBASIC12.87□□□□□ -0.35
CPNE2Q96FN4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 DUX4L47-201ENST00000566374 394 ntBASIC12.87□□□□□ -0.35
CPNE2Q96FN4 AC009407.1-201ENST00000568958 598 ntBASIC12.87□□□□□ -0.35
CPNE2Q96FN4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 BRI3BPP1-201ENST00000594224 787 ntBASIC12.87□□□□□ -0.35
CPNE2Q96FN4 AC099568.2-201ENST00000609194 695 ntBASIC12.87□□□□□ -0.35
CPNE2Q96FN4 AC138649.4-201ENST00000612222 287 ntBASIC12.87□□□□□ -0.35
CPNE2Q96FN4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 LRRC59-203ENST00000576448 1531 ntBASIC12.87□□□□□ -0.35
CPNE2Q96FN4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 AP001267.2-201ENST00000532619 2086 ntBASIC12.87□□□□□ -0.35
CPNE2Q96FN4 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CPNE2Q96FN4 AC089987.1-201ENST00000551654 2209 ntBASIC12.86□□□□□ -0.35
CPNE2Q96FN4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms