Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 AGGF1P1-201ENST00000509500 2073 ntBASIC13.1□□□□□ -0.31
RFT1Q96AA3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 AC104457.1-201ENST00000401024 814 ntBASIC13.1□□□□□ -0.31
RFT1Q96AA3 MIR943-201ENST00000401286 94 ntBASIC13.1□□□□□ -0.31
RFT1Q96AA3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 AL139385.1-201ENST00000611744 3272 ntBASIC13.1□□□□□ -0.31
RFT1Q96AA3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 AC004241.5-201ENST00000623870 2448 ntBASIC13.09□□□□□ -0.31
RFT1Q96AA3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 AL589987.1-201ENST00000453380 819 ntBASIC13.09□□□□□ -0.31
RFT1Q96AA3 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 AL590560.3-201ENST00000623350 461 ntBASIC13.09□□□□□ -0.31
RFT1Q96AA3 AL158212.4-201ENST00000624062 1286 ntBASIC13.09□□□□□ -0.31
RFT1Q96AA3 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.09□□□□□ -0.31
RFT1Q96AA3 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFT1Q96AA3 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms