Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF3Q92576 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHF3Q92576 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF3Q92576 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF3Q92576 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
PHF3Q92576 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF3Q92576 AC006504.5-208ENST00000588784 2401 ntBASIC13.23□□□□□ -0.29
PHF3Q92576 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF3Q92576 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF3Q92576 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF3Q92576 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF3Q92576 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PHF3Q92576 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF3Q92576 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF3Q92576 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.23□□□□□ -0.29
PHF3Q92576 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHF3Q92576 AC041040.2-201ENST00000622926 2899 ntBASIC13.23□□□□□ -0.29
PHF3Q92576 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF3Q92576 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
PHF3Q92576 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF3Q92576 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.23□□□□□ -0.29
PHF3Q92576 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.23□□□□□ -0.29
PHF3Q92576 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.23□□□□□ -0.29
PHF3Q92576 AC116345.2-201ENST00000512837 523 ntBASIC13.23□□□□□ -0.29
PHF3Q92576 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.23□□□□□ -0.29
PHF3Q92576 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
PHF3Q92576 AL161670.2-201ENST00000557650 1227 ntBASIC13.23□□□□□ -0.29
PHF3Q92576 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.23□□□□□ -0.29
PHF3Q92576 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHF3Q92576 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.23□□□□□ -0.29
PHF3Q92576 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.23□□□□□ -0.29
PHF3Q92576 AC128714.1-201ENST00000637035 887 ntBASIC13.23□□□□□ -0.29
PHF3Q92576 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.23□□□□□ -0.29
PHF3Q92576 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
PHF3Q92576 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF3Q92576 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF3Q92576 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF3Q92576 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF3Q92576 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
PHF3Q92576 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.22□□□□□ -0.29
PHF3Q92576 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.22□□□□□ -0.29
PHF3Q92576 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
PHF3Q92576 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
PHF3Q92576 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.22□□□□□ -0.29
PHF3Q92576 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.22□□□□□ -0.29
PHF3Q92576 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.22□□□□□ -0.29
PHF3Q92576 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 AC005740.2-201ENST00000511085 419 ntBASIC13.22□□□□□ -0.29
PHF3Q92576 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.22□□□□□ -0.29
PHF3Q92576 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.22□□□□□ -0.29
PHF3Q92576 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.22□□□□□ -0.29
PHF3Q92576 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.22□□□□□ -0.29
PHF3Q92576 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.22□□□□□ -0.29
PHF3Q92576 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.22□□□□□ -0.29
PHF3Q92576 AC079336.7-201ENST00000623428 1078 ntBASIC13.22□□□□□ -0.29
PHF3Q92576 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.22□□□□□ -0.29
PHF3Q92576 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.22□□□□□ -0.29
PHF3Q92576 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.22□□□□□ -0.29
PHF3Q92576 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
PHF3Q92576 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 FLJ16779-201ENST00000612722 7638 ntBASIC13.22□□□□□ -0.29
PHF3Q92576 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
PHF3Q92576 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
PHF3Q92576 VDAC1P1-201ENST00000439229 848 ntBASIC13.22□□□□□ -0.29
PHF3Q92576 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.22□□□□□ -0.29
PHF3Q92576 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.22□□□□□ -0.29
PHF3Q92576 DUX4L46-201ENST00000566845 751 ntBASIC13.22□□□□□ -0.29
PHF3Q92576 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.22□□□□□ -0.29
PHF3Q92576 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.22□□□□□ -0.29
PHF3Q92576 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.22□□□□□ -0.29
PHF3Q92576 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
PHF3Q92576 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF3Q92576 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
PHF3Q92576 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms