Protein–RNA interactions for Protein: Q8WW27

APOBEC4, Putative C->U-editing enzyme APOBEC-4, humanhuman

Known RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC4Q8WW27 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 AC004899.1-201ENST00000424687 1714 ntBASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 AL157791.1-201ENST00000553667 1699 ntBASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.98□□□□□ -0.17
APOBEC4Q8WW27 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 ACTG1P2-201ENST00000415776 1125 ntBASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 ACTG1P11-201ENST00000425411 1125 ntBASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 AL353637.1-201ENST00000451571 732 ntBASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 AC234782.1-201ENST00000451950 919 ntBASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 AC104073.2-201ENST00000453737 312 ntBASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 AC008267.1-201ENST00000474858 1069 ntBASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 MARK2P5-201ENST00000507649 634 ntBASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 AC100827.2-201ENST00000563214 1194 ntBASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 AL133499.1-201ENST00000596207 608 ntBASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 AC068587.6-202ENST00000641839 5619 ntBASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC4Q8WW27 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.96□□□□□ -0.17
APOBEC4Q8WW27 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC4Q8WW27 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC4Q8WW27 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.96□□□□□ -0.17
APOBEC4Q8WW27 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC4Q8WW27 FKBP4P6-201ENST00000457486 1332 ntBASIC13.96□□□□□ -0.17
APOBEC4Q8WW27 AC006480.2-201ENST00000609770 1337 ntBASIC13.96□□□□□ -0.17
APOBEC4Q8WW27 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.96□□□□□ -0.17
APOBEC4Q8WW27 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
APOBEC4Q8WW27 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.96□□□□□ -0.17
APOBEC4Q8WW27 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
APOBEC4Q8WW27 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.96□□□□□ -0.17
APOBEC4Q8WW27 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms