Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 DMBT1P1-203ENST00000636837 4628 ntBASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 MIR940-201ENST00000401276 94 ntBASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 AC023141.5-201ENST00000458585 616 ntBASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 ZNF890P-202ENST00000530367 1156 ntBASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 AC093813.1-201ENST00000605066 256 ntBASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 AGAP12P-201ENST00000585227 2359 ntBASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.11□□□□□ -0.31
NANOGP1Q8N7R0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 MARK2P9-201ENST00000430958 1727 ntBASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 AL139400.1-201ENST00000366220 510 ntBASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 AC136604.1-202ENST00000425471 771 ntBASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 GCOM2-201ENST00000509133 1104 ntBASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 YBX1P5-201ENST00000509441 847 ntBASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 AP001002.3-201ENST00000623482 206 ntBASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 PCDHB18P-202ENST00000526308 3197 ntBASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NANOGP1Q8N7R0 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms