Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.34■□□□□ 0.37
SLX4Q8IY92 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLX4Q8IY92 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLX4Q8IY92 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SLX4Q8IY92 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLX4Q8IY92 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLX4Q8IY92 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLX4Q8IY92 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC17.34■□□□□ 0.37
SLX4Q8IY92 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLX4Q8IY92 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLX4Q8IY92 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
SLX4Q8IY92 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SLX4Q8IY92 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLX4Q8IY92 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLX4Q8IY92 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLX4Q8IY92 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLX4Q8IY92 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLX4Q8IY92 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLX4Q8IY92 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC17.33■□□□□ 0.37
SLX4Q8IY92 AC023141.7-201ENST00000430646 407 ntBASIC17.33■□□□□ 0.37
SLX4Q8IY92 CDCA4P4-201ENST00000435216 680 ntBASIC17.33■□□□□ 0.37
SLX4Q8IY92 SERBP1P2-201ENST00000436888 1164 ntBASIC17.33■□□□□ 0.37
SLX4Q8IY92 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC17.33■□□□□ 0.37
SLX4Q8IY92 RN7SL351P-201ENST00000469306 248 ntBASIC17.33■□□□□ 0.37
SLX4Q8IY92 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.33■□□□□ 0.37
SLX4Q8IY92 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC17.33■□□□□ 0.37
SLX4Q8IY92 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC17.33■□□□□ 0.37
SLX4Q8IY92 BATF-202ENST00000555504 361 ntTSL 2 BASIC17.33■□□□□ 0.37
SLX4Q8IY92 AL359219.1-201ENST00000556311 934 ntBASIC17.33■□□□□ 0.37
SLX4Q8IY92 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC17.33■□□□□ 0.37
SLX4Q8IY92 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC17.33■□□□□ 0.37
SLX4Q8IY92 URAHP-205ENST00000610227 398 ntBASIC17.33■□□□□ 0.37
SLX4Q8IY92 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC17.33■□□□□ 0.37
SLX4Q8IY92 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.37
SLX4Q8IY92 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
SLX4Q8IY92 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLX4Q8IY92 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLX4Q8IY92 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLX4Q8IY92 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLX4Q8IY92 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SLX4Q8IY92 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SLX4Q8IY92 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SLX4Q8IY92 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLX4Q8IY92 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLX4Q8IY92 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLX4Q8IY92 AC013268.4-201ENST00000637413 2228 ntBASIC17.33■□□□□ 0.36
SLX4Q8IY92 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLX4Q8IY92 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SLX4Q8IY92 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC17.33■□□□□ 0.36
SLX4Q8IY92 PGAM1P11-201ENST00000416729 680 ntBASIC17.33■□□□□ 0.36
SLX4Q8IY92 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SLX4Q8IY92 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLX4Q8IY92 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC17.33■□□□□ 0.36
SLX4Q8IY92 AC023906.1-201ENST00000486386 453 ntBASIC17.33■□□□□ 0.36
SLX4Q8IY92 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC17.33■□□□□ 0.36
SLX4Q8IY92 EMC4-208ENST00000559078 599 ntTSL 3 BASIC17.33■□□□□ 0.36
SLX4Q8IY92 FBXO36P1-201ENST00000579006 471 ntBASIC17.33■□□□□ 0.36
SLX4Q8IY92 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLX4Q8IY92 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLX4Q8IY92 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLX4Q8IY92 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC17.33■□□□□ 0.36
SLX4Q8IY92 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SLX4Q8IY92 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.32■□□□□ 0.36
SLX4Q8IY92 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLX4Q8IY92 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLX4Q8IY92 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLX4Q8IY92 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLX4Q8IY92 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.32■□□□□ 0.36
SLX4Q8IY92 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLX4Q8IY92 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SLX4Q8IY92 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLX4Q8IY92 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLX4Q8IY92 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLX4Q8IY92 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLX4Q8IY92 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLX4Q8IY92 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SLX4Q8IY92 HNRNPA1P42-201ENST00000458678 957 ntBASIC17.32■□□□□ 0.36
SLX4Q8IY92 BCRP4-201ENST00000506079 804 ntBASIC17.32■□□□□ 0.36
SLX4Q8IY92 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC17.32■□□□□ 0.36
SLX4Q8IY92 AC093300.1-201ENST00000510368 1201 ntBASIC17.32■□□□□ 0.36
SLX4Q8IY92 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLX4Q8IY92 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLX4Q8IY92 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC17.32■□□□□ 0.36
SLX4Q8IY92 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC17.32■□□□□ 0.36
SLX4Q8IY92 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLX4Q8IY92 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLX4Q8IY92 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SLX4Q8IY92 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLX4Q8IY92 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.32■□□□□ 0.36
SLX4Q8IY92 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLX4Q8IY92 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLX4Q8IY92 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLX4Q8IY92 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SLX4Q8IY92 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLX4Q8IY92 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLX4Q8IY92 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms