Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC6Q8IVU3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HERC6Q8IVU3 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HERC6Q8IVU3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC6Q8IVU3 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.83■□□□□ 0.12
HERC6Q8IVU3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.83■□□□□ 0.12
HERC6Q8IVU3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HERC6Q8IVU3 TMBIM7P-202ENST00000641474 1516 ntBASIC15.83■□□□□ 0.12
HERC6Q8IVU3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC6Q8IVU3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC6Q8IVU3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC6Q8IVU3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC6Q8IVU3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 HLA-DMA-203ENST00000395305 777 ntBASIC15.82■□□□□ 0.12
HERC6Q8IVU3 AL357563.1-201ENST00000404728 395 ntBASIC15.82■□□□□ 0.12
HERC6Q8IVU3 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.82■□□□□ 0.12
HERC6Q8IVU3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 DUX4L50-201ENST00000455245 715 ntBASIC15.82■□□□□ 0.12
HERC6Q8IVU3 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 CR383656.3-201ENST00000551315 183 ntBASIC15.82■□□□□ 0.12
HERC6Q8IVU3 AC027237.1-201ENST00000560942 655 ntBASIC15.82■□□□□ 0.12
HERC6Q8IVU3 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 MARK2P16-201ENST00000605714 1723 ntBASIC15.82■□□□□ 0.12
HERC6Q8IVU3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.82■□□□□ 0.12
HERC6Q8IVU3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.81■□□□□ 0.12
HERC6Q8IVU3 BCAS2P2-201ENST00000425064 674 ntBASIC15.81■□□□□ 0.12
HERC6Q8IVU3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 AC084752.1-201ENST00000509766 622 ntBASIC15.81■□□□□ 0.12
HERC6Q8IVU3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 AC138466.5-201ENST00000624002 808 ntBASIC15.81■□□□□ 0.12
HERC6Q8IVU3 AC023090.2-201ENST00000625182 2110 ntBASIC15.81■□□□□ 0.12
HERC6Q8IVU3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HERC6Q8IVU3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms