Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 AC087499.6-201ENST00000411576 835 ntBASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 DFFBP1-201ENST00000433250 979 ntBASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 GNAQP1-201ENST00000444815 1067 ntBASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 AC023310.3-201ENST00000557027 670 ntBASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 AC100756.1-201ENST00000562736 682 ntBASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 RRP7BP-205ENST00000566851 833 ntBASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 AC138749.3-201ENST00000567691 622 ntBASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 LINC02560-201ENST00000596379 459 ntBASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 AC000095.1-201ENST00000603208 874 ntBASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 AC116165.1-201ENST00000611806 668 ntBASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 AC027020.2-201ENST00000602585 2389 ntBASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM53Q6P2H8 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 AL391825.1-201ENST00000457671 1364 ntBASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM53Q6P2H8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms