Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
DDR1Q08345 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDR1Q08345 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.89■□□□□ 0.45
DDR1Q08345 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.89■□□□□ 0.45
DDR1Q08345 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
DDR1Q08345 AL109809.1-201ENST00000418979 1367 ntBASIC17.89■□□□□ 0.45
DDR1Q08345 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDR1Q08345 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
DDR1Q08345 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.89■□□□□ 0.45
DDR1Q08345 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDR1Q08345 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DDR1Q08345 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDR1Q08345 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDR1Q08345 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.88■□□□□ 0.45
DDR1Q08345 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.88■□□□□ 0.45
DDR1Q08345 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDR1Q08345 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DDR1Q08345 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDR1Q08345 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC17.88■□□□□ 0.45
DDR1Q08345 HNRNPA1P58-201ENST00000403629 610 ntBASIC17.88■□□□□ 0.45
DDR1Q08345 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC17.88■□□□□ 0.45
DDR1Q08345 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.88■□□□□ 0.45
DDR1Q08345 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC17.88■□□□□ 0.45
DDR1Q08345 VENTXP3-201ENST00000546480 773 ntBASIC17.88■□□□□ 0.45
DDR1Q08345 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC17.88■□□□□ 0.45
DDR1Q08345 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC17.88■□□□□ 0.45
DDR1Q08345 AC145285.5-201ENST00000562217 361 ntBASIC17.88■□□□□ 0.45
DDR1Q08345 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC17.88■□□□□ 0.45
DDR1Q08345 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.88■□□□□ 0.45
DDR1Q08345 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDR1Q08345 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.88■□□□□ 0.45
DDR1Q08345 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
DDR1Q08345 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC17.88■□□□□ 0.45
DDR1Q08345 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DDR1Q08345 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDR1Q08345 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDR1Q08345 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDR1Q08345 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDR1Q08345 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.88■□□□□ 0.45
DDR1Q08345 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.88■□□□□ 0.45
DDR1Q08345 PHB-210ENST00000511832 1509 ntTSL 2 BASIC17.88■□□□□ 0.45
DDR1Q08345 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDR1Q08345 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
DDR1Q08345 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DDR1Q08345 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.87■□□□□ 0.45
DDR1Q08345 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.87■□□□□ 0.45
DDR1Q08345 ODCP-201ENST00000459650 1639 ntBASIC17.87■□□□□ 0.45
DDR1Q08345 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDR1Q08345 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDR1Q08345 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.87■□□□□ 0.45
DDR1Q08345 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.87■□□□□ 0.45
DDR1Q08345 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDR1Q08345 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDR1Q08345 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDR1Q08345 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
DDR1Q08345 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC17.87■□□□□ 0.45
DDR1Q08345 AL929302.1-201ENST00000426556 871 ntBASIC17.87■□□□□ 0.45
DDR1Q08345 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
DDR1Q08345 AC008026.2-201ENST00000495438 348 ntBASIC17.87■□□□□ 0.45
DDR1Q08345 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC17.87■□□□□ 0.45
DDR1Q08345 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDR1Q08345 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDR1Q08345 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDR1Q08345 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDR1Q08345 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC17.87■□□□□ 0.45
DDR1Q08345 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDR1Q08345 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
DDR1Q08345 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
DDR1Q08345 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDR1Q08345 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
DDR1Q08345 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDR1Q08345 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.87■□□□□ 0.45
DDR1Q08345 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDR1Q08345 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDR1Q08345 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDR1Q08345 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDR1Q08345 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
DDR1Q08345 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.86■□□□□ 0.45
DDR1Q08345 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDR1Q08345 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DDR1Q08345 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDR1Q08345 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
DDR1Q08345 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
DDR1Q08345 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
DDR1Q08345 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.86■□□□□ 0.45
DDR1Q08345 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.86■□□□□ 0.45
DDR1Q08345 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.86■□□□□ 0.45
DDR1Q08345 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DDR1Q08345 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DDR1Q08345 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
DDR1Q08345 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC17.86■□□□□ 0.45
DDR1Q08345 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDR1Q08345 GRPEL2P1-201ENST00000453145 339 ntBASIC17.86■□□□□ 0.45
DDR1Q08345 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DDR1Q08345 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC17.86■□□□□ 0.45
DDR1Q08345 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC17.86■□□□□ 0.45
DDR1Q08345 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC17.86■□□□□ 0.45
DDR1Q08345 AL132994.1-201ENST00000554098 400 ntBASIC17.86■□□□□ 0.45
DDR1Q08345 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.86■□□□□ 0.45
DDR1Q08345 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms