Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
AP3S2P59780 AL157996.1-201ENST00000624684 2299 ntBASIC12.67□□□□□ -0.38
AP3S2P59780 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
AP3S2P59780 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.67□□□□□ -0.38
AP3S2P59780 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
AP3S2P59780 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.66□□□□□ -0.38
AP3S2P59780 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 TUBB8P4-201ENST00000511806 1324 ntBASIC12.66□□□□□ -0.38
AP3S2P59780 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.66□□□□□ -0.38
AP3S2P59780 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
AP3S2P59780 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.66□□□□□ -0.38
AP3S2P59780 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.66□□□□□ -0.38
AP3S2P59780 POM121L14P-201ENST00000406100 1558 ntBASIC12.66□□□□□ -0.38
AP3S2P59780 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.66□□□□□ -0.38
AP3S2P59780 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.66□□□□□ -0.38
AP3S2P59780 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
AP3S2P59780 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
AP3S2P59780 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.66□□□□□ -0.38
AP3S2P59780 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
AP3S2P59780 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 SPDYE11-202ENST00000450699 704 ntBASIC12.66□□□□□ -0.38
AP3S2P59780 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.66□□□□□ -0.38
AP3S2P59780 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
AP3S2P59780 AC135782.3-201ENST00000562782 2105 ntBASIC12.66□□□□□ -0.38
AP3S2P59780 AC034105.1-201ENST00000563488 319 ntBASIC12.66□□□□□ -0.38
AP3S2P59780 SPDYE9P-201ENST00000570642 692 ntBASIC12.66□□□□□ -0.38
AP3S2P59780 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.66□□□□□ -0.38
AP3S2P59780 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.66□□□□□ -0.38
AP3S2P59780 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.66□□□□□ -0.38
AP3S2P59780 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
AP3S2P59780 SPDYE10P-202ENST00000612005 668 ntBASIC12.66□□□□□ -0.38
AP3S2P59780 SPDYE8P-202ENST00000612377 668 ntBASIC12.66□□□□□ -0.38
AP3S2P59780 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.66□□□□□ -0.38
AP3S2P59780 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.66□□□□□ -0.38
AP3S2P59780 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
AP3S2P59780 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
AP3S2P59780 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.66□□□□□ -0.38
AP3S2P59780 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.66□□□□□ -0.38
AP3S2P59780 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
AP3S2P59780 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
AP3S2P59780 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
AP3S2P59780 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
AP3S2P59780 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S2P59780 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
AP3S2P59780 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
AP3S2P59780 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
AP3S2P59780 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
AP3S2P59780 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.65□□□□□ -0.38
AP3S2P59780 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
AP3S2P59780 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.65□□□□□ -0.38
AP3S2P59780 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 AL391647.1-201ENST00000395664 511 ntBASIC12.65□□□□□ -0.38
AP3S2P59780 KRT18P64-201ENST00000434946 1219 ntBASIC12.65□□□□□ -0.38
AP3S2P59780 SPCS2P4-201ENST00000436160 681 ntBASIC12.65□□□□□ -0.38
AP3S2P59780 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.65□□□□□ -0.38
AP3S2P59780 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms