Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.54□□□□□ -0.24
CLDN20P56880 AC023310.1-201ENST00000554836 735 ntBASIC13.54□□□□□ -0.24
CLDN20P56880 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.54□□□□□ -0.24
CLDN20P56880 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.54□□□□□ -0.24
CLDN20P56880 AC138466.3-201ENST00000619983 221 ntBASIC13.54□□□□□ -0.24
CLDN20P56880 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN20P56880 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.54□□□□□ -0.24
CLDN20P56880 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN20P56880 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CLDN20P56880 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN20P56880 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CLDN20P56880 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN20P56880 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDN20P56880 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDN20P56880 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CLDN20P56880 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CLDN20P56880 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CLDN20P56880 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDN20P56880 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN20P56880 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CLDN20P56880 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDN20P56880 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CLDN20P56880 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CLDN20P56880 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
CLDN20P56880 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 FAM21FP-201ENST00000426241 1131 ntBASIC13.53□□□□□ -0.24
CLDN20P56880 FAM8A4P-201ENST00000435433 1213 ntBASIC13.53□□□□□ -0.24
CLDN20P56880 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.53□□□□□ -0.24
CLDN20P56880 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.53□□□□□ -0.24
CLDN20P56880 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.53□□□□□ -0.24
CLDN20P56880 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDN20P56880 OR10B1P-201ENST00000601666 907 ntBASIC13.53□□□□□ -0.24
CLDN20P56880 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDN20P56880 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN20P56880 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN20P56880 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN20P56880 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDN20P56880 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
CLDN20P56880 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CLDN20P56880 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CLDN20P56880 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN20P56880 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CLDN20P56880 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN20P56880 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CLDN20P56880 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN20P56880 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN20P56880 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN20P56880 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CLDN20P56880 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN20P56880 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN20P56880 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN20P56880 MTHFR-210ENST00000641407 2387 ntBASIC13.52□□□□□ -0.24
CLDN20P56880 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.52□□□□□ -0.24
CLDN20P56880 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN20P56880 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.52□□□□□ -0.24
CLDN20P56880 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN20P56880 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN20P56880 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
CLDN20P56880 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN20P56880 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN20P56880 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN20P56880 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.52□□□□□ -0.25
CLDN20P56880 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN20P56880 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN20P56880 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN20P56880 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms