Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PKNOX1P55347 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PKNOX1P55347 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PKNOX1P55347 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PKNOX1P55347 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.49□□□□□ -0.09
PKNOX1P55347 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PKNOX1P55347 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PKNOX1P55347 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.49□□□□□ -0.09
PKNOX1P55347 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PKNOX1P55347 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PKNOX1P55347 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PKNOX1P55347 AC131212.3-201ENST00000624087 4219 ntBASIC14.49□□□□□ -0.09
PKNOX1P55347 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.49□□□□□ -0.09
PKNOX1P55347 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PKNOX1P55347 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PKNOX1P55347 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 AL136172.1-201ENST00000598590 1394 ntBASIC14.48□□□□□ -0.09
PKNOX1P55347 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.48□□□□□ -0.09
PKNOX1P55347 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.48□□□□□ -0.09
PKNOX1P55347 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.48□□□□□ -0.09
PKNOX1P55347 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PKNOX1P55347 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.48□□□□□ -0.09
PKNOX1P55347 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PKNOX1P55347 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.48□□□□□ -0.09
PKNOX1P55347 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.48□□□□□ -0.09
PKNOX1P55347 AC087499.6-201ENST00000411576 835 ntBASIC14.48□□□□□ -0.09
PKNOX1P55347 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.48□□□□□ -0.09
PKNOX1P55347 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.48□□□□□ -0.09
PKNOX1P55347 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.48□□□□□ -0.09
PKNOX1P55347 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PKNOX1P55347 KRT18P25-201ENST00000508931 1278 ntBASIC14.48□□□□□ -0.09
PKNOX1P55347 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.48□□□□□ -0.09
PKNOX1P55347 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.48□□□□□ -0.09
PKNOX1P55347 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.48□□□□□ -0.09
PKNOX1P55347 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.48□□□□□ -0.09
PKNOX1P55347 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.48□□□□□ -0.09
PKNOX1P55347 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.48□□□□□ -0.09
PKNOX1P55347 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PKNOX1P55347 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.48□□□□□ -0.09
PKNOX1P55347 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.48□□□□□ -0.09
PKNOX1P55347 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.48□□□□□ -0.09
PKNOX1P55347 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.48□□□□□ -0.09
PKNOX1P55347 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.48□□□□□ -0.09
PKNOX1P55347 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PKNOX1P55347 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PKNOX1P55347 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PKNOX1P55347 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 MYADML-201ENST00000474610 2147 ntBASIC14.48□□□□□ -0.09
PKNOX1P55347 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.48□□□□□ -0.09
PKNOX1P55347 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.48□□□□□ -0.09
PKNOX1P55347 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.48□□□□□ -0.09
PKNOX1P55347 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PKNOX1P55347 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PKNOX1P55347 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PKNOX1P55347 CICP16-201ENST00000502609 2813 ntBASIC14.47□□□□□ -0.09
PKNOX1P55347 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.47□□□□□ -0.09
PKNOX1P55347 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PKNOX1P55347 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PKNOX1P55347 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PKNOX1P55347 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PKNOX1P55347 MRPL37P1-201ENST00000592451 1337 ntBASIC14.47□□□□□ -0.09
PKNOX1P55347 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PKNOX1P55347 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PKNOX1P55347 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
PKNOX1P55347 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.47□□□□□ -0.09
PKNOX1P55347 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PKNOX1P55347 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PKNOX1P55347 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PKNOX1P55347 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.47□□□□□ -0.09
PKNOX1P55347 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.47□□□□□ -0.09
PKNOX1P55347 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PKNOX1P55347 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.47□□□□□ -0.09
PKNOX1P55347 INGX-202ENST00000489074 768 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms