Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.29□□□□□ -0.28
CASP6P55212 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CASP6P55212 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.29□□□□□ -0.28
CASP6P55212 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CASP6P55212 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.29□□□□□ -0.28
CASP6P55212 AL603832.2-201ENST00000566195 2125 ntBASIC13.29□□□□□ -0.28
CASP6P55212 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CASP6P55212 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CASP6P55212 AC132192.2-201ENST00000596206 1147 ntBASIC13.29□□□□□ -0.28
CASP6P55212 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CASP6P55212 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.29□□□□□ -0.28
CASP6P55212 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CASP6P55212 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.29□□□□□ -0.28
CASP6P55212 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CASP6P55212 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.29□□□□□ -0.28
CASP6P55212 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.29□□□□□ -0.28
CASP6P55212 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
CASP6P55212 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CASP6P55212 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CASP6P55212 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CASP6P55212 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CASP6P55212 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CASP6P55212 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CASP6P55212 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CASP6P55212 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CASP6P55212 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CASP6P55212 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CASP6P55212 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CASP6P55212 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CASP6P55212 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
CASP6P55212 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.28□□□□□ -0.28
CASP6P55212 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.28□□□□□ -0.28
CASP6P55212 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.28□□□□□ -0.28
CASP6P55212 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.28□□□□□ -0.28
CASP6P55212 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CASP6P55212 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.28□□□□□ -0.28
CASP6P55212 AL359258.3-201ENST00000622910 2331 ntBASIC13.28□□□□□ -0.28
CASP6P55212 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.28□□□□□ -0.28
CASP6P55212 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.28□□□□□ -0.28
CASP6P55212 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.28□□□□□ -0.28
CASP6P55212 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.28□□□□□ -0.28
CASP6P55212 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.28□□□□□ -0.28
CASP6P55212 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.28□□□□□ -0.28
CASP6P55212 AL592076.1-201ENST00000424448 303 ntBASIC13.28□□□□□ -0.28
CASP6P55212 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.28□□□□□ -0.28
CASP6P55212 RN7SL818P-201ENST00000485099 259 ntBASIC13.28□□□□□ -0.28
CASP6P55212 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.28□□□□□ -0.28
CASP6P55212 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.28□□□□□ -0.28
CASP6P55212 AC009779.1-201ENST00000551138 283 ntBASIC13.28□□□□□ -0.28
CASP6P55212 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.28□□□□□ -0.28
CASP6P55212 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.28□□□□□ -0.28
CASP6P55212 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.28□□□□□ -0.28
CASP6P55212 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CASP6P55212 RN7SL725P-201ENST00000606439 259 ntBASIC13.28□□□□□ -0.28
CASP6P55212 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.28□□□□□ -0.28
CASP6P55212 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.28□□□□□ -0.28
CASP6P55212 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CASP6P55212 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CASP6P55212 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.28□□□□□ -0.28
CASP6P55212 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.28□□□□□ -0.28
CASP6P55212 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CASP6P55212 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CASP6P55212 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.28□□□□□ -0.28
CASP6P55212 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.28□□□□□ -0.28
CASP6P55212 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CASP6P55212 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CASP6P55212 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.28
CASP6P55212 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CASP6P55212 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CASP6P55212 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CASP6P55212 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms