Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.84□□□□□ -0.03
LIMK2P53671 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.84□□□□□ -0.03
LIMK2P53671 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.84□□□□□ -0.03
LIMK2P53671 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.84□□□□□ -0.03
LIMK2P53671 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 PFN1P12-201ENST00000455938 534 ntBASIC14.84□□□□□ -0.03
LIMK2P53671 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.84□□□□□ -0.03
LIMK2P53671 AC023310.1-201ENST00000554836 735 ntBASIC14.84□□□□□ -0.03
LIMK2P53671 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LIMK2P53671 MIR6074-201ENST00000612054 107 ntBASIC14.84□□□□□ -0.03
LIMK2P53671 AC132938.4-201ENST00000623835 848 ntBASIC14.84□□□□□ -0.03
LIMK2P53671 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.84□□□□□ -0.03
LIMK2P53671 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
LIMK2P53671 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.84□□□□□ -0.03
LIMK2P53671 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.84□□□□□ -0.03
LIMK2P53671 KRT8P35-201ENST00000483942 1338 ntBASIC14.84□□□□□ -0.03
LIMK2P53671 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.84□□□□□ -0.03
LIMK2P53671 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.84□□□□□ -0.03
LIMK2P53671 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.84□□□□□ -0.03
LIMK2P53671 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.84□□□□□ -0.03
LIMK2P53671 MBLAC2-202ENST00000514906 1936 ntBASIC14.84□□□□□ -0.03
LIMK2P53671 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
LIMK2P53671 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.84□□□□□ -0.03
LIMK2P53671 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.84□□□□□ -0.03
LIMK2P53671 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
LIMK2P53671 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.83□□□□□ -0.03
LIMK2P53671 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
LIMK2P53671 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
LIMK2P53671 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LIMK2P53671 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LIMK2P53671 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LIMK2P53671 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.83□□□□□ -0.03
LIMK2P53671 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.83□□□□□ -0.03
LIMK2P53671 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LIMK2P53671 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 TCAM1P-207ENST00000485295 1537 ntBASIC14.83□□□□□ -0.04
LIMK2P53671 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LIMK2P53671 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.83□□□□□ -0.04
LIMK2P53671 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.83□□□□□ -0.04
LIMK2P53671 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 AC006001.1-201ENST00000325130 474 ntBASIC14.83□□□□□ -0.04
LIMK2P53671 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LIMK2P53671 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LIMK2P53671 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.83□□□□□ -0.04
LIMK2P53671 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.83□□□□□ -0.04
LIMK2P53671 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.83□□□□□ -0.04
LIMK2P53671 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.83□□□□□ -0.04
LIMK2P53671 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.83□□□□□ -0.04
LIMK2P53671 AC004466.1-201ENST00000599515 1080 ntBASIC14.83□□□□□ -0.04
LIMK2P53671 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.83□□□□□ -0.04
LIMK2P53671 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.83□□□□□ -0.04
LIMK2P53671 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.83□□□□□ -0.04
LIMK2P53671 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
LIMK2P53671 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.83□□□□□ -0.04
LIMK2P53671 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.83□□□□□ -0.04
LIMK2P53671 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK2P53671 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LIMK2P53671 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LIMK2P53671 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.82□□□□□ -0.04
LIMK2P53671 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.82□□□□□ -0.04
LIMK2P53671 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LIMK2P53671 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LIMK2P53671 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms