Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
LIMK1P53667 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
LIMK1P53667 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.45□□□□□ -0.1
LIMK1P53667 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LIMK1P53667 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LIMK1P53667 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LIMK1P53667 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.45□□□□□ -0.1
LIMK1P53667 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LIMK1P53667 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.45□□□□□ -0.1
LIMK1P53667 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC14.45□□□□□ -0.1
LIMK1P53667 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 AC004837.1-201ENST00000446267 564 ntBASIC14.45□□□□□ -0.1
LIMK1P53667 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.45□□□□□ -0.1
LIMK1P53667 AC114947.1-202ENST00000514136 344 ntBASIC14.45□□□□□ -0.1
LIMK1P53667 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.45□□□□□ -0.1
LIMK1P53667 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC14.45□□□□□ -0.1
LIMK1P53667 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.45□□□□□ -0.1
LIMK1P53667 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.45□□□□□ -0.1
LIMK1P53667 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.45□□□□□ -0.1
LIMK1P53667 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.45□□□□□ -0.1
LIMK1P53667 EIF5AP2-201ENST00000585668 1047 ntBASIC14.45□□□□□ -0.1
LIMK1P53667 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
LIMK1P53667 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.45□□□□□ -0.1
LIMK1P53667 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LIMK1P53667 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LIMK1P53667 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.45□□□□□ -0.1
LIMK1P53667 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.45□□□□□ -0.1
LIMK1P53667 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
LIMK1P53667 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
LIMK1P53667 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.44□□□□□ -0.1
LIMK1P53667 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.44□□□□□ -0.1
LIMK1P53667 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LIMK1P53667 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.44□□□□□ -0.1
LIMK1P53667 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC14.44□□□□□ -0.1
LIMK1P53667 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LIMK1P53667 TSPY25P-201ENST00000429463 745 ntBASIC14.44□□□□□ -0.1
LIMK1P53667 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.44□□□□□ -0.1
LIMK1P53667 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LIMK1P53667 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LIMK1P53667 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LIMK1P53667 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.44□□□□□ -0.1
LIMK1P53667 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.44□□□□□ -0.1
LIMK1P53667 AC011840.2-201ENST00000563063 1520 ntBASIC14.44□□□□□ -0.1
LIMK1P53667 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.44□□□□□ -0.1
LIMK1P53667 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIMK1P53667 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LIMK1P53667 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LIMK1P53667 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 FGD5P1-202ENST00000614866 2498 ntBASIC14.43□□□□□ -0.1
LIMK1P53667 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.43□□□□□ -0.1
LIMK1P53667 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.43□□□□□ -0.1
LIMK1P53667 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LIMK1P53667 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.43□□□□□ -0.1
LIMK1P53667 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms