Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC9.41□□□□□ -0.9
UBE2AP49459 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC9.41□□□□□ -0.9
UBE2AP49459 SLC6A4-203ENST00000401766 6543 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
UBE2AP49459 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC9.41□□□□□ -0.9
UBE2AP49459 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
UBE2AP49459 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
UBE2AP49459 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
UBE2AP49459 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
UBE2AP49459 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
UBE2AP49459 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC9.41□□□□□ -0.9
UBE2AP49459 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC9.41□□□□□ -0.9
UBE2AP49459 SOCS2P1-201ENST00000417727 557 ntBASIC9.41□□□□□ -0.9
UBE2AP49459 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC9.41□□□□□ -0.9
UBE2AP49459 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC9.41□□□□□ -0.9
UBE2AP49459 CD81-207ENST00000481687 890 ntTSL 2 BASIC9.41□□□□□ -0.9
UBE2AP49459 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC9.41□□□□□ -0.9
UBE2AP49459 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC9.41□□□□□ -0.9
UBE2AP49459 AP001582.1-201ENST00000525856 295 ntBASIC9.41□□□□□ -0.9
UBE2AP49459 RFPL4AP1-201ENST00000530883 850 ntBASIC9.41□□□□□ -0.9
UBE2AP49459 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC9.41□□□□□ -0.9
UBE2AP49459 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC9.41□□□□□ -0.9
UBE2AP49459 RRP7BP-205ENST00000566851 833 ntBASIC9.41□□□□□ -0.9
UBE2AP49459 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
UBE2AP49459 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC9.41□□□□□ -0.9
UBE2AP49459 AC007431.3-201ENST00000623221 587 ntBASIC9.41□□□□□ -0.9
UBE2AP49459 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC9.41□□□□□ -0.9
UBE2AP49459 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC9.41□□□□□ -0.9
UBE2AP49459 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
UBE2AP49459 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 INTS4P2-202ENST00000614726 2019 ntBASIC9.41□□□□□ -0.9
UBE2AP49459 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 AC005912.2-201ENST00000619492 2400 ntBASIC9.41□□□□□ -0.9
UBE2AP49459 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 AL139385.1-201ENST00000611744 3272 ntBASIC9.41□□□□□ -0.9
UBE2AP49459 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE2AP49459 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
UBE2AP49459 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
UBE2AP49459 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
UBE2AP49459 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC9.4□□□□□ -0.9
UBE2AP49459 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC9.4□□□□□ -0.9
UBE2AP49459 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC9.4□□□□□ -0.9
UBE2AP49459 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
UBE2AP49459 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC9.4□□□□□ -0.9
UBE2AP49459 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC9.4□□□□□ -0.9
UBE2AP49459 AL360270.3-201ENST00000609118 1348 ntBASIC9.4□□□□□ -0.9
UBE2AP49459 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC9.4□□□□□ -0.9
UBE2AP49459 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC9.4□□□□□ -0.9
UBE2AP49459 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC9.4□□□□□ -0.9
UBE2AP49459 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
UBE2AP49459 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 C1QBPP1-201ENST00000400117 770 ntBASIC9.4□□□□□ -0.9
UBE2AP49459 AC104457.1-201ENST00000401024 814 ntBASIC9.4□□□□□ -0.9
UBE2AP49459 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 AC087499.6-201ENST00000411576 835 ntBASIC9.4□□□□□ -0.9
UBE2AP49459 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC9.4□□□□□ -0.9
UBE2AP49459 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
UBE2AP49459 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC9.4□□□□□ -0.9
UBE2AP49459 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC9.4□□□□□ -0.9
UBE2AP49459 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC9.4□□□□□ -0.9
UBE2AP49459 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms