RNA–Protein interactions for RNA: ENST00000401766.6

SLC6A4-203, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLC6A4, Length 6,543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-203ENST00000401766 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
SLC6A4-203ENST00000401766 FAM9AQ8IZU1 332 aaPredicted RBP19.76■□□□□ 0.75
SLC6A4-203ENST00000401766 MYT1LQ9UL68 1186 aa19.05■□□□□ 0.64
SLC6A4-203ENST00000401766 EHMT2Q96KQ7 1210 aa18.89■□□□□ 0.61
SLC6A4-203ENST00000401766 TTBK1Q5TCY1 1321 aaPredicted RBP18.79■□□□□ 0.6
SLC6A4-203ENST00000401766 ATP1B4Q9UN42 357 aaPredicted RBP18.74■□□□□ 0.59
SLC6A4-203ENST00000401766 CHIC1Q5VXU3 224 aa18.69■□□□□ 0.58
SLC6A4-203ENST00000401766 RANGAP1P46060 587 aaPredicted RBP18.53■□□□□ 0.56
SLC6A4-203ENST00000401766 APLP2Q06481 763 aa18.51■□□□□ 0.55
SLC6A4-203ENST00000401766 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
SLC6A4-203ENST00000401766 NISCHQ9Y2I1 1504 aa18.44■□□□□ 0.54
SLC6A4-203ENST00000401766 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.39■□□□□ 0.53
SLC6A4-203ENST00000401766 HNRNPUL2Q1KMD3 747 aaKnown RBP18.39■□□□□ 0.53
SLC6A4-203ENST00000401766 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.53
SLC6A4-203ENST00000401766 PLPPR3Q6T4P5 718 aa18.31■□□□□ 0.52
SLC6A4-203ENST00000401766 AEBP2Q6ZN18 517 aaPredicted RBP18.16■□□□□ 0.5
SLC6A4-203ENST00000401766 FBLN2P98095 1184 aa18.09■□□□□ 0.49
SLC6A4-203ENST00000401766 BCANQ96GW7 911 aa17.98■□□□□ 0.47
SLC6A4-203ENST00000401766 ESF1Q9H501 851 aaKnown RBP17.87■□□□□ 0.45
SLC6A4-203ENST00000401766 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
SLC6A4-203ENST00000401766 SLC4A1APQ9BWU0 796 aaKnown RBP17.8■□□□□ 0.44
SLC6A4-203ENST00000401766 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.43
SLC6A4-203ENST00000401766 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
SLC6A4-203ENST00000401766 NPM1P06748 294 aaKnown RBP eCLIP17.66■□□□□ 0.42
SLC6A4-203ENST00000401766 ABCC9O60706 1549 aa17.59■□□□□ 0.41
SLC6A4-203ENST00000401766 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
SLC6A4-203ENST00000401766 A0A0G2JS52 829 aa17.51■□□□□ 0.39
SLC6A4-203ENST00000401766 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
SLC6A4-203ENST00000401766 UBTFP17480 764 aaKnown RBP17.48■□□□□ 0.39
SLC6A4-203ENST00000401766 SLC24A1O60721 1099 aa17.47■□□□□ 0.39
SLC6A4-203ENST00000401766 PELP1Q8IZL8 1130 aaKnown RBP17.36■□□□□ 0.37
SLC6A4-203ENST00000401766 POLR3GLQ9BT43 218 aa17.33■□□□□ 0.37
SLC6A4-203ENST00000401766 STAG3Q9UJ98 1225 aa17.32■□□□□ 0.36
SLC6A4-203ENST00000401766 ARID4BQ4LE39 1312 aaPredicted RBP17.27■□□□□ 0.36
SLC6A4-203ENST00000401766 MYT1Q01538 1121 aa17.21■□□□□ 0.35
SLC6A4-203ENST00000401766 C14orf37Q86TY3 774 aa17.17■□□□□ 0.34
SLC6A4-203ENST00000401766 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
SLC6A4-203ENST00000401766 PLEKHG5O94827 1062 aa17.16■□□□□ 0.34
SLC6A4-203ENST00000401766 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
SLC6A4-203ENST00000401766 DCAF8L1A6NGE4 600 aa17.07■□□□□ 0.32
SLC6A4-203ENST00000401766 ITGAEP38570 1179 aa17.06■□□□□ 0.32
SLC6A4-203ENST00000401766 ARID3CA6NKF2 412 aa17.05■□□□□ 0.32
SLC6A4-203ENST00000401766 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
SLC6A4-203ENST00000401766 PCGF6Q9BYE7 350 aa16.95■□□□□ 0.3
SLC6A4-203ENST00000401766 CHGAP10645 457 aaKnown RBP16.94■□□□□ 0.3
SLC6A4-203ENST00000401766 ZBTB7CA1YPR0 619 aa16.92■□□□□ 0.3
SLC6A4-203ENST00000401766 NPM2Q86SE8 214 aaKnown RBP16.8■□□□□ 0.28
SLC6A4-203ENST00000401766 ZNF777Q9ULD5 760 aaPredicted RBP16.79■□□□□ 0.28
SLC6A4-203ENST00000401766 ERCC6Q03468 1493 aa16.77■□□□□ 0.28
SLC6A4-203ENST00000401766 CHMP7Q8WUX9 453 aaPredicted RBP16.76■□□□□ 0.27
SLC6A4-203ENST00000401766 CENPBP07199 599 aaPredicted RBP16.72■□□□□ 0.27
SLC6A4-203ENST00000401766 ZEB1P37275 1124 aaPredicted RBP16.71■□□□□ 0.27
SLC6A4-203ENST00000401766 TRIM52Q96A61 297 aa16.7■□□□□ 0.26
SLC6A4-203ENST00000401766 CCER1Q8TC90 406 aaPredicted RBP16.7■□□□□ 0.26
SLC6A4-203ENST00000401766 NPHP1O15259 732 aa16.69■□□□□ 0.26
SLC6A4-203ENST00000401766 PPP1R15AO75807 674 aaPredicted RBP16.67■□□□□ 0.26
SLC6A4-203ENST00000401766 ERICH6Q7L0X2 663 aa16.67■□□□□ 0.26
SLC6A4-203ENST00000401766 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.64■□□□□ 0.25
SLC6A4-203ENST00000401766 BCL11AQ9H165 835 aa16.64■□□□□ 0.25
SLC6A4-203ENST00000401766 NEFMP07197 916 aa16.62■□□□□ 0.25
SLC6A4-203ENST00000401766 LMOD2Q6P5Q4 547 aa16.61■□□□□ 0.25
SLC6A4-203ENST00000401766 FOXD1Q16676 465 aa16.59■□□□□ 0.25
SLC6A4-203ENST00000401766 ZNF326Q5BKZ1 582 aaKnown RBP16.59■□□□□ 0.25
SLC6A4-203ENST00000401766 CCDC9Q9Y3X0 531 aaKnown RBP16.58■□□□□ 0.24
SLC6A4-203ENST00000401766 MEX3CQ5U5Q3 659 aaKnown RBP16.57■□□□□ 0.24
SLC6A4-203ENST00000401766 KCNH8Q96L42 1107 aa16.57■□□□□ 0.24
SLC6A4-203ENST00000401766 ARXQ96QS3 562 aa16.56■□□□□ 0.24
SLC6A4-203ENST00000401766 FAM50AQ14320 339 aaKnown RBP16.55■□□□□ 0.24
SLC6A4-203ENST00000401766 MLECQ14165 292 aa16.55■□□□□ 0.24
SLC6A4-203ENST00000401766 P3H3Q8IVL6 736 aa16.51■□□□□ 0.23
SLC6A4-203ENST00000401766 ZBTB47Q9UFB7 747 aaPredicted RBP16.46■□□□□ 0.23
SLC6A4-203ENST00000401766 CDK11AQ9UQ88 783 aaPredicted RBP16.45■□□□□ 0.22
SLC6A4-203ENST00000401766 KLHL34Q8N239 644 aa16.42■□□□□ 0.22
SLC6A4-203ENST00000401766 PPARGC1BQ86YN6 1023 aaKnown RBP16.41■□□□□ 0.22
SLC6A4-203ENST00000401766 NEFLP07196 543 aa16.4■□□□□ 0.22
SLC6A4-203ENST00000401766 YTHDC1Q96MU7 727 aaKnown RBP16.39■□□□□ 0.21
SLC6A4-203ENST00000401766 SF3B2Q13435 895 aaKnown RBP16.2■□□□□ 0.18
SLC6A4-203ENST00000401766 CYB5RLQ6IPT4 315 aa16.2■□□□□ 0.18
SLC6A4-203ENST00000401766 TRIM26Q12899 539 aaPredicted RBP16.2■□□□□ 0.18
SLC6A4-203ENST00000401766 MSH5O43196 834 aa16.18■□□□□ 0.18
SLC6A4-203ENST00000401766 CLSPNQ9HAW4 1339 aa16.18■□□□□ 0.18
SLC6A4-203ENST00000401766 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.15■□□□□ 0.18
SLC6A4-203ENST00000401766 KRI1Q8N9T8 703 aaKnown RBP16.14■□□□□ 0.17
SLC6A4-203ENST00000401766 TMX4Q9H1E5 349 aaPredicted RBP16.14■□□□□ 0.17
SLC6A4-203ENST00000401766 DAXXQ9UER7 740 aaPredicted RBP16.14■□□□□ 0.17
SLC6A4-203ENST00000401766 TULP1O00294 542 aaPredicted RBP16.11■□□□□ 0.17
SLC6A4-203ENST00000401766 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
SLC6A4-203ENST00000401766 CANXP27824 592 aaKnown RBP16.02■□□□□ 0.15
SLC6A4-203ENST00000401766 HRCP23327 699 aa16.02■□□□□ 0.15
SLC6A4-203ENST00000401766 CFAP44Q96MT7 982 aa16.01■□□□□ 0.15
SLC6A4-203ENST00000401766 PPP1R1BQ9UD71 204 aaPredicted RBP16■□□□□ 0.15
SLC6A4-203ENST00000401766 LOC105371045A0A1W2PR82 267 aa15.98■□□□□ 0.15
SLC6A4-203ENST00000401766 TSPY4P0CV99 314 aa15.96■□□□□ 0.15
SLC6A4-203ENST00000401766 TSPY10P0CW01 314 aa15.96■□□□□ 0.15
SLC6A4-203ENST00000401766 NEUROD1Q13562 356 aa15.96■□□□□ 0.15
SLC6A4-203ENST00000401766 HDGFP51858 240 aaKnown RBP15.94■□□□□ 0.14
SLC6A4-203ENST00000401766 GOLGA2Q08379 1002 aa15.94■□□□□ 0.14
SLC6A4-203ENST00000401766 PIP4K2BP78356 416 aa15.94■□□□□ 0.14
SLC6A4-203ENST00000401766 CSB-PGBD3P0DP91 1061 aa15.93■□□□□ 0.14
SLC6A4-203ENST00000401766 G3V3G9 751 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms