Protein–RNA interactions for Protein: P49221

TGM4, Protein-glutamine gamma-glutamyltransferase 4, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGM4P49221 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.27□□□□□ -0.29
TGM4P49221 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.27□□□□□ -0.29
TGM4P49221 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TGM4P49221 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TGM4P49221 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TGM4P49221 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TGM4P49221 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.27□□□□□ -0.29
TGM4P49221 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.26□□□□□ -0.29
TGM4P49221 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.26□□□□□ -0.29
TGM4P49221 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TGM4P49221 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.26□□□□□ -0.29
TGM4P49221 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.26□□□□□ -0.29
TGM4P49221 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TGM4P49221 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.26□□□□□ -0.29
TGM4P49221 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.26□□□□□ -0.29
TGM4P49221 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.26□□□□□ -0.29
TGM4P49221 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.26□□□□□ -0.29
TGM4P49221 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.26□□□□□ -0.29
TGM4P49221 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.26□□□□□ -0.29
TGM4P49221 AGAP10P-201ENST00000454844 2418 ntBASIC13.26□□□□□ -0.29
TGM4P49221 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.26□□□□□ -0.29
TGM4P49221 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.26□□□□□ -0.29
TGM4P49221 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.26□□□□□ -0.29
TGM4P49221 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.26□□□□□ -0.29
TGM4P49221 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 ZNF890P-202ENST00000530367 1156 ntBASIC13.26□□□□□ -0.29
TGM4P49221 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.26□□□□□ -0.29
TGM4P49221 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TGM4P49221 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TGM4P49221 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
TGM4P49221 AL844908.2-201ENST00000609461 460 ntBASIC13.26□□□□□ -0.29
TGM4P49221 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
TGM4P49221 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.26□□□□□ -0.29
TGM4P49221 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TGM4P49221 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TGM4P49221 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TGM4P49221 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TGM4P49221 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TGM4P49221 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.25□□□□□ -0.29
TGM4P49221 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TGM4P49221 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.25□□□□□ -0.29
TGM4P49221 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TGM4P49221 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.25□□□□□ -0.29
TGM4P49221 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TGM4P49221 AL445209.1-201ENST00000607269 3491 ntBASIC13.25□□□□□ -0.29
TGM4P49221 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TGM4P49221 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TGM4P49221 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TGM4P49221 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TGM4P49221 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.25□□□□□ -0.29
TGM4P49221 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.25□□□□□ -0.29
TGM4P49221 TCAM1P-207ENST00000485295 1537 ntBASIC13.25□□□□□ -0.29
TGM4P49221 AC020910.6-201ENST00000623084 1459 ntBASIC13.25□□□□□ -0.29
TGM4P49221 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TGM4P49221 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TGM4P49221 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TGM4P49221 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.25□□□□□ -0.29
TGM4P49221 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TGM4P49221 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.25□□□□□ -0.29
TGM4P49221 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
TGM4P49221 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TGM4P49221 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TGM4P49221 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.25□□□□□ -0.29
TGM4P49221 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.25□□□□□ -0.29
TGM4P49221 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TGM4P49221 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TGM4P49221 MIR770-201ENST00000390219 98 ntBASIC13.25□□□□□ -0.29
TGM4P49221 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.25□□□□□ -0.29
TGM4P49221 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.25□□□□□ -0.29
TGM4P49221 BASP1P1-201ENST00000430708 665 ntBASIC13.25□□□□□ -0.29
TGM4P49221 AL353779.1-201ENST00000434793 351 ntBASIC13.25□□□□□ -0.29
TGM4P49221 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.25□□□□□ -0.29
TGM4P49221 RNA5SP421-201ENST00000516864 134 ntBASIC13.25□□□□□ -0.29
TGM4P49221 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.25□□□□□ -0.29
TGM4P49221 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.25□□□□□ -0.29
TGM4P49221 TIMM17BP1-201ENST00000545713 516 ntBASIC13.25□□□□□ -0.29
TGM4P49221 AC092337.1-201ENST00000568699 1129 ntBASIC13.25□□□□□ -0.29
TGM4P49221 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.25□□□□□ -0.29
TGM4P49221 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms