Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.06□□□□□ -0.48
CEACAM3P40198 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CEACAM3P40198 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CEACAM3P40198 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CEACAM3P40198 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.06□□□□□ -0.48
CEACAM3P40198 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.06□□□□□ -0.48
CEACAM3P40198 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
CEACAM3P40198 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.06□□□□□ -0.48
CEACAM3P40198 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.06□□□□□ -0.48
CEACAM3P40198 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.06□□□□□ -0.48
CEACAM3P40198 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.06□□□□□ -0.48
CEACAM3P40198 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.05□□□□□ -0.48
CEACAM3P40198 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.05□□□□□ -0.48
CEACAM3P40198 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.05□□□□□ -0.48
CEACAM3P40198 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.05□□□□□ -0.48
CEACAM3P40198 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.05□□□□□ -0.48
CEACAM3P40198 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CEACAM3P40198 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
CEACAM3P40198 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CEACAM3P40198 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CEACAM3P40198 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CEACAM3P40198 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CEACAM3P40198 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.05□□□□□ -0.48
CEACAM3P40198 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 RN7SKP230-201ENST00000365642 335 ntBASIC12.05□□□□□ -0.48
CEACAM3P40198 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CEACAM3P40198 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.05□□□□□ -0.48
CEACAM3P40198 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.05□□□□□ -0.48
CEACAM3P40198 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.05□□□□□ -0.48
CEACAM3P40198 AC079178.1-201ENST00000420915 656 ntBASIC12.05□□□□□ -0.48
CEACAM3P40198 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.05□□□□□ -0.48
CEACAM3P40198 PPY2P-201ENST00000582808 702 ntBASIC12.05□□□□□ -0.48
CEACAM3P40198 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.05□□□□□ -0.48
CEACAM3P40198 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 AL359881.2-201ENST00000602973 570 ntBASIC12.05□□□□□ -0.48
CEACAM3P40198 MIR6775-201ENST00000617557 69 ntBASIC12.05□□□□□ -0.48
CEACAM3P40198 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.05□□□□□ -0.48
CEACAM3P40198 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.05□□□□□ -0.48
CEACAM3P40198 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CEACAM3P40198 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CEACAM3P40198 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.05□□□□□ -0.48
CEACAM3P40198 AL023775.1-201ENST00000454907 1746 ntBASIC12.05□□□□□ -0.48
CEACAM3P40198 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.05□□□□□ -0.48
CEACAM3P40198 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CEACAM3P40198 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CEACAM3P40198 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.05□□□□□ -0.48
CEACAM3P40198 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CEACAM3P40198 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.04□□□□□ -0.48
CEACAM3P40198 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.04□□□□□ -0.48
CEACAM3P40198 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CEACAM3P40198 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CEACAM3P40198 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
CEACAM3P40198 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.04□□□□□ -0.48
CEACAM3P40198 KRT8P4-201ENST00000509735 1454 ntBASIC12.04□□□□□ -0.48
CEACAM3P40198 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.04□□□□□ -0.48
CEACAM3P40198 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CEACAM3P40198 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 SNX18-202ENST00000343017 3140 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms