Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.52■□□□□ 0.08
RFC1P35251 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RFC1P35251 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.52■□□□□ 0.07
RFC1P35251 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RFC1P35251 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFC1P35251 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.52■□□□□ 0.07
RFC1P35251 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RFC1P35251 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.52■□□□□ 0.07
RFC1P35251 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RFC1P35251 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RFC1P35251 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RFC1P35251 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFC1P35251 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFC1P35251 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFC1P35251 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFC1P35251 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFC1P35251 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.52■□□□□ 0.07
RFC1P35251 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RFC1P35251 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RFC1P35251 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC1P35251 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RFC1P35251 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC1P35251 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
RFC1P35251 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.51■□□□□ 0.07
RFC1P35251 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
RFC1P35251 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.51■□□□□ 0.07
RFC1P35251 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RFC1P35251 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RFC1P35251 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RFC1P35251 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC1P35251 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC1P35251 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC1P35251 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RFC1P35251 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 RPL7P3-201ENST00000441388 714 ntBASIC15.51■□□□□ 0.07
RFC1P35251 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.51■□□□□ 0.07
RFC1P35251 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.51■□□□□ 0.07
RFC1P35251 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC1P35251 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RFC1P35251 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.51■□□□□ 0.07
RFC1P35251 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.51■□□□□ 0.07
RFC1P35251 KRT17P8-201ENST00000540749 863 ntBASIC15.51■□□□□ 0.07
RFC1P35251 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.51■□□□□ 0.07
RFC1P35251 AC106886.1-201ENST00000568660 600 ntBASIC15.51■□□□□ 0.07
RFC1P35251 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
RFC1P35251 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.51■□□□□ 0.07
RFC1P35251 AL162274.1-201ENST00000617191 1098 ntBASIC15.51■□□□□ 0.07
RFC1P35251 AC002472.3-201ENST00000640124 621 ntBASIC15.51■□□□□ 0.07
RFC1P35251 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RFC1P35251 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 KHSRPP1-201ENST00000427983 1768 ntBASIC15.51■□□□□ 0.07
RFC1P35251 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RFC1P35251 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.51■□□□□ 0.07
RFC1P35251 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC1P35251 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC1P35251 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
RFC1P35251 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RFC1P35251 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC1P35251 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.5■□□□□ 0.07
RFC1P35251 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RFC1P35251 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.5■□□□□ 0.07
RFC1P35251 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.5■□□□□ 0.07
RFC1P35251 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
RFC1P35251 AL590440.2-201ENST00000641973 1595 ntBASIC15.5■□□□□ 0.07
RFC1P35251 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RFC1P35251 AC067750.1-201ENST00000608826 6545 ntBASIC15.5■□□□□ 0.07
RFC1P35251 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RFC1P35251 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms