Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA13P31271 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXA13P31271 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA13P31271 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
HOXA13P31271 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA13P31271 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXA13P31271 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA13P31271 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA13P31271 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA13P31271 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
HOXA13P31271 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA13P31271 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HOXA13P31271 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HOXA13P31271 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA13P31271 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HOXA13P31271 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
HOXA13P31271 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.64■□□□□ 0.26
HOXA13P31271 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.64■□□□□ 0.26
HOXA13P31271 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.64■□□□□ 0.26
HOXA13P31271 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HOXA13P31271 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXA13P31271 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXA13P31271 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HOXA13P31271 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HOXA13P31271 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HOXA13P31271 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HOXA13P31271 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXA13P31271 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 XBP1P1-201ENST00000436573 652 ntBASIC16.64■□□□□ 0.25
HOXA13P31271 OR2R1P-201ENST00000441404 914 ntBASIC16.64■□□□□ 0.25
HOXA13P31271 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.64■□□□□ 0.25
HOXA13P31271 AC073150.1-201ENST00000450406 1084 ntBASIC16.64■□□□□ 0.25
HOXA13P31271 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.64■□□□□ 0.25
HOXA13P31271 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXA13P31271 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.64■□□□□ 0.25
HOXA13P31271 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.64■□□□□ 0.25
HOXA13P31271 AL161670.2-201ENST00000557650 1227 ntBASIC16.64■□□□□ 0.25
HOXA13P31271 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HOXA13P31271 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXA13P31271 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXA13P31271 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXA13P31271 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
HOXA13P31271 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXA13P31271 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXA13P31271 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXA13P31271 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HOXA13P31271 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXA13P31271 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXA13P31271 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HOXA13P31271 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HOXA13P31271 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXA13P31271 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXA13P31271 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HOXA13P31271 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA13P31271 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
HOXA13P31271 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXA13P31271 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA13P31271 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HOXA13P31271 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA13P31271 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA13P31271 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HOXA13P31271 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.63■□□□□ 0.25
HOXA13P31271 AC097359.2-201ENST00000604992 2389 ntBASIC16.63■□□□□ 0.25
HOXA13P31271 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXA13P31271 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA13P31271 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA13P31271 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA13P31271 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HOXA13P31271 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.63■□□□□ 0.25
HOXA13P31271 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.63■□□□□ 0.25
HOXA13P31271 RN7SL720P-201ENST00000488178 304 ntBASIC16.63■□□□□ 0.25
HOXA13P31271 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.63■□□□□ 0.25
HOXA13P31271 AC022447.6-201ENST00000515522 438 ntBASIC16.63■□□□□ 0.25
HOXA13P31271 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXA13P31271 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXA13P31271 AC027237.1-201ENST00000560942 655 ntBASIC16.63■□□□□ 0.25
HOXA13P31271 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXA13P31271 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HOXA13P31271 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA13P31271 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXA13P31271 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms