Protein–RNA interactions for Protein: P28328

PEX2, Peroxisome biogenesis factor 2, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX2P28328 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.86□□□□□ -0.19
PEX2P28328 RN7SL589P-201ENST00000481268 310 ntBASIC13.86□□□□□ -0.19
PEX2P28328 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.86□□□□□ -0.19
PEX2P28328 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PEX2P28328 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.86□□□□□ -0.19
PEX2P28328 LINC01225-203ENST00000563550 1244 ntBASIC13.86□□□□□ -0.19
PEX2P28328 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.86□□□□□ -0.19
PEX2P28328 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.86□□□□□ -0.19
PEX2P28328 AC064836.3-201ENST00000607928 673 ntBASIC13.86□□□□□ -0.19
PEX2P28328 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PEX2P28328 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
PEX2P28328 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PEX2P28328 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PEX2P28328 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PEX2P28328 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PEX2P28328 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.86□□□□□ -0.19
PEX2P28328 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
PEX2P28328 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PEX2P28328 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PEX2P28328 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PEX2P28328 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.86□□□□□ -0.19
PEX2P28328 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.86□□□□□ -0.19
PEX2P28328 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PEX2P28328 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PEX2P28328 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.86□□□□□ -0.19
PEX2P28328 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
PEX2P28328 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.85□□□□□ -0.19
PEX2P28328 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.85□□□□□ -0.19
PEX2P28328 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
PEX2P28328 PEG13-201ENST00000631594 5667 ntBASIC13.85□□□□□ -0.19
PEX2P28328 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PEX2P28328 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PEX2P28328 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.85□□□□□ -0.19
PEX2P28328 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.85□□□□□ -0.19
PEX2P28328 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PEX2P28328 AL353705.2-201ENST00000428243 662 ntBASIC13.85□□□□□ -0.19
PEX2P28328 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.85□□□□□ -0.19
PEX2P28328 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.85□□□□□ -0.19
PEX2P28328 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.85□□□□□ -0.19
PEX2P28328 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.85□□□□□ -0.19
PEX2P28328 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.85□□□□□ -0.19
PEX2P28328 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.85□□□□□ -0.19
PEX2P28328 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.85□□□□□ -0.19
PEX2P28328 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.85□□□□□ -0.19
PEX2P28328 AC243562.1-201ENST00000560672 389 ntBASIC13.85□□□□□ -0.19
PEX2P28328 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.85□□□□□ -0.19
PEX2P28328 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.85□□□□□ -0.19
PEX2P28328 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.85□□□□□ -0.19
PEX2P28328 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.85□□□□□ -0.19
PEX2P28328 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.85□□□□□ -0.19
PEX2P28328 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PEX2P28328 BX640515.1-201ENST00000617215 977 ntBASIC13.85□□□□□ -0.19
PEX2P28328 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.85□□□□□ -0.19
PEX2P28328 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.85□□□□□ -0.19
PEX2P28328 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
PEX2P28328 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PEX2P28328 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PEX2P28328 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PEX2P28328 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.84□□□□□ -0.19
PEX2P28328 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PEX2P28328 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PEX2P28328 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PEX2P28328 KRT8P12-202ENST00000472924 1397 ntBASIC13.84□□□□□ -0.19
PEX2P28328 MARK2P9-201ENST00000430958 1727 ntBASIC13.84□□□□□ -0.19
PEX2P28328 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PEX2P28328 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PEX2P28328 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PEX2P28328 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.84□□□□□ -0.19
PEX2P28328 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PEX2P28328 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.84□□□□□ -0.19
PEX2P28328 AP003969.2-201ENST00000623739 2275 ntBASIC13.84□□□□□ -0.19
PEX2P28328 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PEX2P28328 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PEX2P28328 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PEX2P28328 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
PEX2P28328 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PEX2P28328 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PEX2P28328 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PEX2P28328 AC102953.2-201ENST00000609755 3026 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms