Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.95□□□□□ -0.34
ATF1P18846 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
ATF1P18846 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
ATF1P18846 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 AL139094.1-201ENST00000405549 1188 ntBASIC12.95□□□□□ -0.34
ATF1P18846 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.95□□□□□ -0.34
ATF1P18846 AC134915.1-201ENST00000426461 574 ntBASIC12.95□□□□□ -0.34
ATF1P18846 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.95□□□□□ -0.34
ATF1P18846 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.95□□□□□ -0.34
ATF1P18846 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.95□□□□□ -0.34
ATF1P18846 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.95□□□□□ -0.34
ATF1P18846 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.95□□□□□ -0.34
ATF1P18846 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.95□□□□□ -0.34
ATF1P18846 AC007431.3-201ENST00000623221 587 ntBASIC12.95□□□□□ -0.34
ATF1P18846 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.95□□□□□ -0.34
ATF1P18846 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.95□□□□□ -0.34
ATF1P18846 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ATF1P18846 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.95□□□□□ -0.34
ATF1P18846 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
ATF1P18846 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.95□□□□□ -0.34
ATF1P18846 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ATF1P18846 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ATF1P18846 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
ATF1P18846 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.95□□□□□ -0.34
ATF1P18846 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ATF1P18846 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
ATF1P18846 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.94□□□□□ -0.34
ATF1P18846 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ATF1P18846 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ATF1P18846 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.94□□□□□ -0.34
ATF1P18846 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.94□□□□□ -0.34
ATF1P18846 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.94□□□□□ -0.34
ATF1P18846 MRPS18AP1-201ENST00000414458 589 ntBASIC12.94□□□□□ -0.34
ATF1P18846 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.94□□□□□ -0.34
ATF1P18846 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.94□□□□□ -0.34
ATF1P18846 BASP1P1-201ENST00000430708 665 ntBASIC12.94□□□□□ -0.34
ATF1P18846 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ATF1P18846 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 AC104596.2-201ENST00000512793 793 ntBASIC12.94□□□□□ -0.34
ATF1P18846 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.94□□□□□ -0.34
ATF1P18846 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.94□□□□□ -0.34
ATF1P18846 DUX4L47-201ENST00000566374 394 ntBASIC12.94□□□□□ -0.34
ATF1P18846 AC120045.2-201ENST00000567334 178 ntBASIC12.94□□□□□ -0.34
ATF1P18846 SPDYE22P-201ENST00000582158 798 ntBASIC12.94□□□□□ -0.34
ATF1P18846 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.94□□□□□ -0.34
ATF1P18846 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.94□□□□□ -0.34
ATF1P18846 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.94□□□□□ -0.34
ATF1P18846 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.94□□□□□ -0.34
ATF1P18846 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.94□□□□□ -0.34
ATF1P18846 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
ATF1P18846 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ATF1P18846 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ATF1P18846 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.94□□□□□ -0.34
ATF1P18846 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.94□□□□□ -0.34
ATF1P18846 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATF1P18846 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms