Protein–RNA interactions for Protein: O95696

BRD1, Bromodomain-containing protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1O95696 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.14■□□□□ 0.33
BRD1O95696 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
BRD1O95696 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC17.14■□□□□ 0.33
BRD1O95696 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.13■□□□□ 0.33
BRD1O95696 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BRD1O95696 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BRD1O95696 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
BRD1O95696 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 AC004945.1-201ENST00000416738 983 ntBASIC17.13■□□□□ 0.33
BRD1O95696 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
BRD1O95696 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.13■□□□□ 0.33
BRD1O95696 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.13■□□□□ 0.33
BRD1O95696 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.13■□□□□ 0.33
BRD1O95696 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.13■□□□□ 0.33
BRD1O95696 TMEM261P1-201ENST00000604899 340 ntBASIC17.13■□□□□ 0.33
BRD1O95696 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.13■□□□□ 0.33
BRD1O95696 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.13■□□□□ 0.33
BRD1O95696 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.13■□□□□ 0.33
BRD1O95696 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC17.13■□□□□ 0.33
BRD1O95696 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 AL591122.2-201ENST00000624125 1853 ntBASIC17.13■□□□□ 0.33
BRD1O95696 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
BRD1O95696 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
BRD1O95696 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.13■□□□□ 0.33
BRD1O95696 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.13■□□□□ 0.33
BRD1O95696 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.13■□□□□ 0.33
BRD1O95696 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.13■□□□□ 0.33
BRD1O95696 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRD1O95696 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC17.13■□□□□ 0.33
BRD1O95696 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BRD1O95696 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BRD1O95696 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRD1O95696 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BRD1O95696 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
BRD1O95696 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRD1O95696 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRD1O95696 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRD1O95696 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC17.12■□□□□ 0.33
BRD1O95696 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
BRD1O95696 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.12■□□□□ 0.33
BRD1O95696 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRD1O95696 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
BRD1O95696 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRD1O95696 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
BRD1O95696 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
BRD1O95696 AC098850.1-201ENST00000419919 790 ntBASIC17.12■□□□□ 0.33
BRD1O95696 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRD1O95696 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRD1O95696 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.12■□□□□ 0.33
BRD1O95696 MYCLP2-201ENST00000449268 967 ntBASIC17.12■□□□□ 0.33
BRD1O95696 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.12■□□□□ 0.33
BRD1O95696 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.12■□□□□ 0.33
BRD1O95696 AC123567.1-201ENST00000548294 1261 ntBASIC17.12■□□□□ 0.33
BRD1O95696 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.12■□□□□ 0.33
BRD1O95696 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.12■□□□□ 0.33
BRD1O95696 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC17.12■□□□□ 0.33
BRD1O95696 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRD1O95696 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRD1O95696 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
BRD1O95696 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRD1O95696 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BRD1O95696 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
BRD1O95696 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRD1O95696 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRD1O95696 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BRD1O95696 AC020910.5-201ENST00000623668 1865 ntBASIC17.12■□□□□ 0.33
BRD1O95696 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRD1O95696 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRD1O95696 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
BRD1O95696 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
BRD1O95696 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
BRD1O95696 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRD1O95696 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRD1O95696 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
BRD1O95696 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRD1O95696 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRD1O95696 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRD1O95696 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.11■□□□□ 0.33
BRD1O95696 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms