Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
OPHN1O60890 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.44■□□□□ 0.06
OPHN1O60890 MIR326-201ENST00000362220 95 ntBASIC15.44■□□□□ 0.06
OPHN1O60890 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.44■□□□□ 0.06
OPHN1O60890 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.44■□□□□ 0.06
OPHN1O60890 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.44■□□□□ 0.06
OPHN1O60890 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.44■□□□□ 0.06
OPHN1O60890 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.44■□□□□ 0.06
OPHN1O60890 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.44■□□□□ 0.06
OPHN1O60890 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
OPHN1O60890 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.44■□□□□ 0.06
OPHN1O60890 AC022616.1-201ENST00000518688 554 ntBASIC15.44■□□□□ 0.06
OPHN1O60890 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.44■□□□□ 0.06
OPHN1O60890 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.44■□□□□ 0.06
OPHN1O60890 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.44■□□□□ 0.06
OPHN1O60890 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.44■□□□□ 0.06
OPHN1O60890 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.44■□□□□ 0.06
OPHN1O60890 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
OPHN1O60890 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
OPHN1O60890 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
OPHN1O60890 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
OPHN1O60890 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.44■□□□□ 0.06
OPHN1O60890 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
OPHN1O60890 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
OPHN1O60890 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
OPHN1O60890 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
OPHN1O60890 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.43■□□□□ 0.06
OPHN1O60890 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.43■□□□□ 0.06
OPHN1O60890 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
OPHN1O60890 MSTO2P-201ENST00000314835 1709 ntBASIC15.43■□□□□ 0.06
OPHN1O60890 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.43■□□□□ 0.06
OPHN1O60890 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.43■□□□□ 0.06
OPHN1O60890 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.43■□□□□ 0.06
OPHN1O60890 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 RNU1-114P-201ENST00000365297 166 ntBASIC15.43■□□□□ 0.06
OPHN1O60890 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.43■□□□□ 0.06
OPHN1O60890 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
OPHN1O60890 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.43■□□□□ 0.06
OPHN1O60890 CALR4P-201ENST00000431943 946 ntBASIC15.43■□□□□ 0.06
OPHN1O60890 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.43■□□□□ 0.06
OPHN1O60890 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.43■□□□□ 0.06
OPHN1O60890 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.43■□□□□ 0.06
OPHN1O60890 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.43■□□□□ 0.06
OPHN1O60890 FAM86HP-204ENST00000513466 959 ntBASIC15.43■□□□□ 0.06
OPHN1O60890 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
OPHN1O60890 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.43■□□□□ 0.06
OPHN1O60890 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.43■□□□□ 0.06
OPHN1O60890 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.43■□□□□ 0.06
OPHN1O60890 AC106872.11-201ENST00000605838 421 ntBASIC15.43■□□□□ 0.06
OPHN1O60890 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
OPHN1O60890 AC005252.2-201ENST00000624630 1141 ntBASIC15.43■□□□□ 0.06
OPHN1O60890 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
OPHN1O60890 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.43■□□□□ 0.06
OPHN1O60890 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.43■□□□□ 0.06
OPHN1O60890 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.43■□□□□ 0.06
OPHN1O60890 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.43■□□□□ 0.06
OPHN1O60890 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
OPHN1O60890 AC041040.2-201ENST00000622926 2899 ntBASIC15.43■□□□□ 0.06
OPHN1O60890 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
OPHN1O60890 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.43■□□□□ 0.06
OPHN1O60890 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
OPHN1O60890 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms