Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PAX4O43316 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
PAX4O43316 AC015656.1-201ENST00000624209 3578 ntBASIC10.63□□□□□ -0.71
PAX4O43316 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC10.63□□□□□ -0.71
PAX4O43316 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
PAX4O43316 FGD5P1-202ENST00000614866 2498 ntBASIC10.63□□□□□ -0.71
PAX4O43316 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
PAX4O43316 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
PAX4O43316 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC10.63□□□□□ -0.71
PAX4O43316 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PAX4O43316 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
PAX4O43316 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.63□□□□□ -0.71
PAX4O43316 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PAX4O43316 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC10.63□□□□□ -0.71
PAX4O43316 CICP23-201ENST00000605013 2741 ntBASIC10.63□□□□□ -0.71
PAX4O43316 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PAX4O43316 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
PAX4O43316 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
PAX4O43316 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC10.62□□□□□ -0.71
PAX4O43316 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC10.62□□□□□ -0.71
PAX4O43316 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC10.62□□□□□ -0.71
PAX4O43316 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC10.62□□□□□ -0.71
PAX4O43316 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
PAX4O43316 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC10.62□□□□□ -0.71
PAX4O43316 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC10.62□□□□□ -0.71
PAX4O43316 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
PAX4O43316 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC10.62□□□□□ -0.71
PAX4O43316 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
PAX4O43316 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC10.62□□□□□ -0.71
PAX4O43316 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
PAX4O43316 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC10.62□□□□□ -0.71
PAX4O43316 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC10.62□□□□□ -0.71
PAX4O43316 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC10.62□□□□□ -0.71
PAX4O43316 RPL28-203ENST00000428193 573 ntTSL 2 BASIC10.62□□□□□ -0.71
PAX4O43316 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC10.62□□□□□ -0.71
PAX4O43316 RPL28-204ENST00000431533 590 ntTSL 2 BASIC10.62□□□□□ -0.71
PAX4O43316 C2orf27AP3-201ENST00000434123 579 ntBASIC10.62□□□□□ -0.71
PAX4O43316 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC10.62□□□□□ -0.71
PAX4O43316 MTND2P25-201ENST00000449028 610 ntBASIC10.62□□□□□ -0.71
PAX4O43316 RPL28-207ENST00000558815 616 ntTSL 2 BASIC10.62□□□□□ -0.71
PAX4O43316 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC10.62□□□□□ -0.71
PAX4O43316 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC10.62□□□□□ -0.71
PAX4O43316 AL354718.3-201ENST00000616414 581 ntBASIC10.62□□□□□ -0.71
PAX4O43316 CR382287.1-201ENST00000623954 586 ntBASIC10.62□□□□□ -0.71
PAX4O43316 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.62□□□□□ -0.71
PAX4O43316 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC10.62□□□□□ -0.71
PAX4O43316 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
PAX4O43316 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
PAX4O43316 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
PAX4O43316 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
PAX4O43316 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC10.62□□□□□ -0.71
PAX4O43316 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 SF1-209ENST00000433274 2317 ntTSL 2 BASIC10.62□□□□□ -0.71
PAX4O43316 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
PAX4O43316 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
PAX4O43316 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
PAX4O43316 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
PAX4O43316 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PAX4O43316 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.61□□□□□ -0.71
PAX4O43316 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms