Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ATP2A1O14983 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ATP2A1O14983 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A1O14983 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ATP2A1O14983 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.74■□□□□ 0.27
ATP2A1O14983 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A1O14983 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A1O14983 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A1O14983 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A1O14983 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.74■□□□□ 0.27
ATP2A1O14983 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ATP2A1O14983 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A1O14983 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A1O14983 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.74■□□□□ 0.27
ATP2A1O14983 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.74■□□□□ 0.27
ATP2A1O14983 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A1O14983 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A1O14983 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.74■□□□□ 0.27
ATP2A1O14983 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.74■□□□□ 0.27
ATP2A1O14983 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.74■□□□□ 0.27
ATP2A1O14983 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
ATP2A1O14983 MIR3147-201ENST00000577811 66 ntBASIC16.74■□□□□ 0.27
ATP2A1O14983 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.74■□□□□ 0.27
ATP2A1O14983 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.74■□□□□ 0.27
ATP2A1O14983 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.74■□□□□ 0.27
ATP2A1O14983 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.74■□□□□ 0.27
ATP2A1O14983 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A1O14983 AGAP7P-201ENST00000582299 2062 ntBASIC16.74■□□□□ 0.27
ATP2A1O14983 AGAP14-201ENST00000624701 2060 ntBASIC16.74■□□□□ 0.27
ATP2A1O14983 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A1O14983 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.74■□□□□ 0.27
ATP2A1O14983 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A1O14983 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A1O14983 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.74■□□□□ 0.27
ATP2A1O14983 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ATP2A1O14983 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
ATP2A1O14983 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 AC091951.1-201ENST00000512854 2465 ntBASIC16.73■□□□□ 0.27
ATP2A1O14983 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
ATP2A1O14983 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.73■□□□□ 0.27
ATP2A1O14983 KRT8P31-201ENST00000504812 1408 ntBASIC16.73■□□□□ 0.27
ATP2A1O14983 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.73■□□□□ 0.27
ATP2A1O14983 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 AC006504.5-208ENST00000588784 2401 ntBASIC16.73■□□□□ 0.27
ATP2A1O14983 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.73■□□□□ 0.27
ATP2A1O14983 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 MIR557-201ENST00000385239 98 ntBASIC16.73■□□□□ 0.27
ATP2A1O14983 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
ATP2A1O14983 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.73■□□□□ 0.27
ATP2A1O14983 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.73■□□□□ 0.27
ATP2A1O14983 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.73■□□□□ 0.27
ATP2A1O14983 AC253536.4-201ENST00000440539 267 ntBASIC16.73■□□□□ 0.27
ATP2A1O14983 AC098935.1-201ENST00000446057 611 ntBASIC16.73■□□□□ 0.27
ATP2A1O14983 FGFR3P1-201ENST00000449999 601 ntBASIC16.73■□□□□ 0.27
ATP2A1O14983 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.73■□□□□ 0.27
ATP2A1O14983 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.73■□□□□ 0.27
ATP2A1O14983 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.73■□□□□ 0.27
ATP2A1O14983 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.73■□□□□ 0.27
ATP2A1O14983 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.73■□□□□ 0.27
ATP2A1O14983 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ATP2A1O14983 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ATP2A1O14983 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ATP2A1O14983 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.73■□□□□ 0.27
ATP2A1O14983 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A1O14983 AC018442.1-201ENST00000421439 2061 ntBASIC16.73■□□□□ 0.27
ATP2A1O14983 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.72■□□□□ 0.27
ATP2A1O14983 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A1O14983 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.72■□□□□ 0.27
ATP2A1O14983 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A1O14983 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
ATP2A1O14983 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.72■□□□□ 0.27
ATP2A1O14983 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ATP2A1O14983 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms