Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 CICP23-201ENST00000605013 2741 ntBASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 CYP46A4P-201ENST00000414953 267 ntBASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 TUBB8P8-201ENST00000458717 1058 ntBASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 AC091544.8-201ENST00000619490 361 ntBASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 SHC1P1-201ENST00000425230 1745 ntBASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 AC018442.1-201ENST00000421439 2061 ntBASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 AC023824.1-201ENST00000562945 2975 ntBASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA3F8WFD2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 E2F3P2-201ENST00000447755 1422 ntBASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 CICP14-201ENST00000629111 2732 ntBASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms