Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 HINT1-205ENST00000508488 703 ntTSL 2 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 AC012073.1-201ENST00000606114 1108 ntBASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 AC010976.2-201ENST00000609697 852 ntBASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 AC002472.4-201ENST00000641915 272 ntBASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 AC015802.1-201ENST00000588104 1449 ntBASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 GAS7-216ENST00000583882 553 ntTSL 5 BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 AC011471.3-201ENST00000623576 402 ntBASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 AL451007.2-201ENST00000632004 563 ntBASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 AL672207.1-201ENST00000328462 1570 ntBASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHANK2Q9UPX8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
SHANK2Q9UPX8 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 GOLGA8UP-201ENST00000527159 1755 ntBASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 KRT17P4-201ENST00000429445 819 ntBASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 PRSS3P1-201ENST00000503996 742 ntBASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 AC013553.1-201ENST00000560906 267 ntBASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 AL031673.1-201ENST00000611460 466 ntBASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 CTBP2P8-201ENST00000422584 1330 ntBASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 TRMT112P3-201ENST00000580149 358 ntBASIC21.2■□□□□ 0.98
SHANK2Q9UPX8 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms