Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 AL354702.1-201ENST00000442006 1960 ntBASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 OR7E115P-201ENST00000382617 1024 ntBASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 AC083801.1-201ENST00000491689 358 ntBASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 ALG1L3P-201ENST00000503331 765 ntBASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC52A1Q9NWF4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 AC091951.1-201ENST00000512854 2465 ntBASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 PHB-210ENST00000511832 1509 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 KRT18P62-201ENST00000446618 1287 ntBASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 AL132994.1-201ENST00000554098 400 ntBASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 AC068831.5-201ENST00000557387 328 ntBASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 CMC2-204ENST00000562713 573 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 CMC2-209ENST00000565108 399 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 AC007952.5-201ENST00000572818 1486 ntBASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 AMT-256ENST00000638063 1783 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 AGAP7P-201ENST00000582299 2062 ntBASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 AGAP14-201ENST00000624701 2060 ntBASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 SHMT1P1-201ENST00000419974 1312 ntBASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC52A1Q9NWF4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 AC007950.2-201ENST00000615045 2347 ntBASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 AL109809.1-201ENST00000418979 1367 ntBASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 PSAT1P2-201ENST00000426107 972 ntBASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms